| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4412 |
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| Symbol | |
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| ID | 3907387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5275757 |
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| End bp | 5277037 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637881743 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_483487 |
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| Protein GI | 86743087 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0475548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGGG TTGACGACCC GGAGAACACC TTTGACGTCA TTGTCGTCGG GGCGGGTCCG
GCCGGTGGCA GCGCGGCGCG GGCGGCGGCG AACGCCGGGG CCCGGGTGTG CGTGCTCGAA
CGCTCGGCGG TACCTCGTTA CAAGACCTGC GGTGGCGGCC TGGTCGGCCT TTCGGCGGAT
CATCTCGGCA TCGAACTGGC CGGTCTGGTT CGAGCCAGCG TCAGCTCCCT GACGATGACC
TGGGACGGCC GCTTCGAGGT CACCCGCGGC CGGTCCGGCG GCCGTCCCTG GATGTCGATG
GTGATGCGAT CCGATCTGGA CGCCGCTCTC CTGGCCGCGG CGGCCGCGGC CGGCGCGACC
GTGCGGACCG GTGCGCACGT GGTGGGGCTG ACCGAGAGCG GGCCGGGCGG GACCGGGATC
GCCGAGGACG CCGGGGATCA GGACGACGGT TGGGTGACCG TGCGTCTGCG TGCGGGGGCG
GACCTGCGCG CTCGGGTGGT GGTGGGTGCG GACGGCACCT CGGGTCGTTG CGGCACCTAT
GTCGGTGTCC GCTGTGACCA GGTCGACGTC GGCCTGGAGG GCGAGTTTGT CGCCGACCCG
GCGCGTGCCG CGCGATGGGC CGGACGCATG CTCATCGACT GGGGGCCGGT GCCGGGTTCC
TACGGGTGGG TGTTCCCCAA GGGACGGGTG CTCACGGTCG GCGTGATCGG TGATCGTGCC
GAGGGCGCCG CGCTGCGCGC CTATTACACC CGGTTCGTCG ACCGTCTCGG GCTCACCGAC
CTGCCGCGCC AGCATGACTC CGGACATCTC ACCCGGGTGC GGGCCGTCGC CTCCCCGCTG
CGGCGGGGCC GGGTGTTGGT CGCGGGGGAC GCGGCCGGGC TCCTGGATCC GTGGACACGC
GAAGGCATCT CGTTCGCATT ACGGTCGGGT CGGCTCGCCG GGGAGGCGGC CGCCGCGGCG
AGTGTGGGCG TCGGTCGCGC GAGGGCGGGC GTGACCCGGG CCGGGGGGGT AACGGATACA
AGGCCCACTG GCCCGGGCGC CACGGCGCTC GACGCCTTGG CGGCCTATCC CGCGCGCGTC
GAGGCGATCC TGGGCCCCGA GATGGCGGCG GGACGAGAGG TCCTGGCCGC GTTCACCCGC
CGGCCGGGCG CGATGCACAC GGTCATGGCG GCTCCGGGCA CCTTCGGGCT GTTCACCCGG
CTCATCGAGG GACGGACCAC CATCGCCCGG CAACTGCGTC GTCCCGGCGT GCGGGCGGCG
GTGGCGGCAC TGAGCCACTG A
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| Protein sequence | MSRVDDPENT FDVIVVGAGP AGGSAARAAA NAGARVCVLE RSAVPRYKTC GGGLVGLSAD
HLGIELAGLV RASVSSLTMT WDGRFEVTRG RSGGRPWMSM VMRSDLDAAL LAAAAAAGAT
VRTGAHVVGL TESGPGGTGI AEDAGDQDDG WVTVRLRAGA DLRARVVVGA DGTSGRCGTY
VGVRCDQVDV GLEGEFVADP ARAARWAGRM LIDWGPVPGS YGWVFPKGRV LTVGVIGDRA
EGAALRAYYT RFVDRLGLTD LPRQHDSGHL TRVRAVASPL RRGRVLVAGD AAGLLDPWTR
EGISFALRSG RLAGEAAAAA SVGVGRARAG VTRAGGVTDT RPTGPGATAL DALAAYPARV
EAILGPEMAA GREVLAAFTR RPGAMHTVMA APGTFGLFTR LIEGRTTIAR QLRRPGVRAA
VAALSH
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