| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4306 |
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| Symbol | |
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| ID | 3907274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5142635 |
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| End bp | 5144827 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637881633 |
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| Product | thymidylate kinase |
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| Protein accession | YP_483381 |
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| Protein GI | 86742981 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCACCG ACCATGCAGC CGGATCTCGG GACGCCGGGC GGCGCCCACC CTGGCCCGTC
CGGCGACCGC GGGTCCGCCG CTCGCCGAGC AGGCATCCGG TGACGACGGT TCCCTCGCCG
CCAATGCCGT CCACCATCGC CGCCGGAGGC GACAGCGACA TCCGGGCCGT CCTGCGGATC
CCCGCGTTCC GCCGGATGTG GATTCAGCTC AGCCTGTCCA GCCTGGGTGA CTGGATGGGT
CTGCTGGCAA CCACCGCACT GGTGACCCAG CTCCAGGAGA GCTTCTCCGG GCAGGCGTAC
GCCATCGGCT CGCTGCTGAT CGTCCGGTTG ATGCCGGCCC TGATCCTGGG CCCACTCGCC
GGTGCCCTCG CCGACAGGCT GGACCGCCGG CTGACCATGG TCGTGACGGA CGTCATGCGG
TTCGGGCTGT TCATGTCGAT CCCGATCATC GGGACGCTCA AGTGGCTGCT CATCGCATCG
TTCCTGGTGG AGGCGGTCAC CCTGGTGTGG GCGCCGGCGA AGGACGCGAG CGTCCCGCAC
CTGGTGCCCA AGGAGCGGCT CGCGGCCGCC AACACCCTCA GCCTGATCAT GACCTACGGC
ACGGCCCCGA TCGCCGCGAC GATCTTCACG ATGCTTGCGA CGATCTCACG GACGCTCGGC
TCCAGCGTGT CGTTCTTCCA TGACTCCTCG GTCGACCTCG CGTTGTACTT CAACGCGGCG
ACGTTCCTCG GCTCGGCAAT CGTGATCTGG GGACTGAAGG GCATCGGACG GGCCGCGCGG
CCGGAGACCG GCCCCGAGCC CGGGTTCTTG GCCTCCATCA CCGAGGGATG GCGCTACGTC
GGCCAGGACA AACTGGTCCG CGGACTCGTC GTGGGCATCC TGGGCGGGTT CGCCGGCGCC
GGCTGCGTCA TCGCCCTCGG CCGGCTCTAC GTCGAGATCC TGGGCGGCGG CGACTCCGCG
TACGGGGTGC TCTTCGGCGC GGTGTTCGTC GGCCTCGCCG CCGGCATGGC CGCCGGTCCC
AAGCTGCTCG GCGACTACAG TCGGACCCGC CTGTTCGGCG TCTGCGTGAC CGGGGCGGGT
ATCACCCTGG TGATCGTCGC GATCATCCCG AACCTGGTCA TCGCCTGCAT CCTCGTGGTC
GCGGTGGGGG CGTTCGCCGG CGTGGCCTGG GTGACCGGAT ACACCCTGCT CCAGGCCGAG
GTCTCCGACG AGCTGCGGGG GCGCACCTTC GCCCTGGTGC AGTCGCTGGT CCGCATCGAC
CTGCTGCTCG TGCTCGCCGC CGCGCCCGGC CTGGTTGGCC TCATCGGCTC GCACAGGATC
CATCTGTGGG GCGACATCAA CGTCCGCGCG GACGGCGTCA CCGCGGTCCT GCTCGCCGGC
GGTCTGCTCG CCGTCGCGGT CGGCCTGTTC TCCTATCGGC AGATGGACGA CCCGACCGGA
GCCGCGGTCT GGCCCGAGCT GTGGAACGCG CTGCGCGGCC GGCGGCCGGC GGCCACACGT
CCCCGCCGCA CCGGCCTGTT CATCGCGATC GAGGGCATCG ATGGCGCCGG CAAGAGCACA
CAGGTGGAGC TGCTACGAAC GTGGCTCGCC TCCTCCGGCC GGGAGGTGGT GGTGACCTCC
GAATCCGGCG GCACCGCACT GGGAACGGGC CTGCGAGAAC TGCTCCTCGA CCCGACGGTA
CGGCTGCACC CCCGGACCGA GGCGCTGCTG ACCGCGGCGG ACCGCGCCGA ACACGTCGCG
CAGGTGATCG AACCCGCGCT GGCCCGGGGA GCGATCGTCA TCACCGATCG TTACGTCGAC
TCGTTCATCG CCTTCCAGAG CGTGAGCCAG GCCCTCAGCA CCGACGAGCT GTCCGTCCTC
ACCCAGTGGG CGACGCACGC GCTGCTTCCC GACGTCACGG TCCTGTTGGA TCTGCCGGCC
GAGATCGTCC TGCGCCGCGC GCGGATGACC GCGTATCCTG ATCCGCCGCC GGGGCCGCCG
GGGCCGCCGG ACGGCCCGGC CGAGGCGGAC GACGCCGGGA AGTTGACCTT CCAGGGCCGG
GTACGCGACA CGTTCCGTCG GCTGGCGCAG AAGGAGCCCG ATCGTTACCT TCCGCTAGAC
GCGACGCGGT CACCGGAGGA GATCCACGCC GAGATCCGCT CGTTCATGGC CAGCCGCATC
GATCGGCCAG CCGTCCTGCT CGGTGTGCTC TGA
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| Protein sequence | MATDHAAGSR DAGRRPPWPV RRPRVRRSPS RHPVTTVPSP PMPSTIAAGG DSDIRAVLRI
PAFRRMWIQL SLSSLGDWMG LLATTALVTQ LQESFSGQAY AIGSLLIVRL MPALILGPLA
GALADRLDRR LTMVVTDVMR FGLFMSIPII GTLKWLLIAS FLVEAVTLVW APAKDASVPH
LVPKERLAAA NTLSLIMTYG TAPIAATIFT MLATISRTLG SSVSFFHDSS VDLALYFNAA
TFLGSAIVIW GLKGIGRAAR PETGPEPGFL ASITEGWRYV GQDKLVRGLV VGILGGFAGA
GCVIALGRLY VEILGGGDSA YGVLFGAVFV GLAAGMAAGP KLLGDYSRTR LFGVCVTGAG
ITLVIVAIIP NLVIACILVV AVGAFAGVAW VTGYTLLQAE VSDELRGRTF ALVQSLVRID
LLLVLAAAPG LVGLIGSHRI HLWGDINVRA DGVTAVLLAG GLLAVAVGLF SYRQMDDPTG
AAVWPELWNA LRGRRPAATR PRRTGLFIAI EGIDGAGKST QVELLRTWLA SSGREVVVTS
ESGGTALGTG LRELLLDPTV RLHPRTEALL TAADRAEHVA QVIEPALARG AIVITDRYVD
SFIAFQSVSQ ALSTDELSVL TQWATHALLP DVTVLLDLPA EIVLRRARMT AYPDPPPGPP
GPPDGPAEAD DAGKLTFQGR VRDTFRRLAQ KEPDRYLPLD ATRSPEEIHA EIRSFMASRI
DRPAVLLGVL
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