Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4239 |
Symbol | |
ID | 3907205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5057602 |
End bp | 5058603 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637881565 |
Product | periplasmic binding protein |
Protein accession | YP_483314 |
Protein GI | 86742914 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.364549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TCGGCGCCGG CGTCGCGGTC GCTGCCCTGC TCGTTGTTAC CGCCGGTCTC ACCGGCTGCG GGTCCGGTTC GACCACCGGC GCGGGCAGTG CGAGCGCGGC CGATGCCCGG TCGGCCCCGG CCGGTACCCG CTATCCCGTT GAGGTGGCGA ACTGCGGCCG GACCCTGCAC TTCGACGAGG CCCCGGCGCG GGTCGTCTCC GGGTGGACCA CCAGTACCGA GCTCCTCATC GAACTGGGCC TGACGGACCG GATTGTTGGC CAGTACAACA CCAGCAGCGG CACACCGGCG GCGAAGTACG CCAGTGTGGA GGCGAAGCTA CCCGCCCTCG GTACCGGCGC ACCGACCCGG GAGGCGCTGC TCGCCGCCCG GCCCGACCTG ATCTGGGCGG ATGGCAGCTA TCTGTTTGAC GGCCGGCAGC TCCCCACGAT CGCCGAGCTG GCCGCCCAGG GCACCCAGGT GATGATTCTC AGCGGGTTCT GCACCGACGA CGCCACCAAG GCGACGGTCC GTGACGTCGA TACCGACCTG ACCGCGCTCG GCATGATCTT CGGCATTCCG GGCCGGGCCA GGCAGGTCCA GGCCGACATC AACGAACGGC TCCGCCAGGT CGCGACGAAG ATCCAGGGCA GGGACCCCGT CCCGGTCGCG GTGGTCGCCA CCTACCAGGG AACCGTCTAC ACCTACGACG GCGTCTACAC CGACATCGCG CGGCTCGCCG GGGCGCGGAA CATCTACGCG GGCACCCTGC CCAAGGGCAA ATACTTCAGT GAGCTGTCGG TGGAGGACCT CATCAGCAAG AATCCCGGCA CCCTCGTCTA TCTGCTCAGC GGCAGCGAAA CCGAGGCCGA GGCCCGCAAG TTCCTCACCT CCCGGCTCCC GACCGTGGCG GCAGTCCGCA ACAACCGTGT GTTCTTCCTC CCGCAGTCGG ACTCGGCCAA CCTCGCCGGC GTGGAAGGCG TGACAAAGCT GGCCGCCGCG CTGCACGCCT GA
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Protein sequence | MKKLGAGVAV AALLVVTAGL TGCGSGSTTG AGSASAADAR SAPAGTRYPV EVANCGRTLH FDEAPARVVS GWTTSTELLI ELGLTDRIVG QYNTSSGTPA AKYASVEAKL PALGTGAPTR EALLAARPDL IWADGSYLFD GRQLPTIAEL AAQGTQVMIL SGFCTDDATK ATVRDVDTDL TALGMIFGIP GRARQVQADI NERLRQVATK IQGRDPVPVA VVATYQGTVY TYDGVYTDIA RLAGARNIYA GTLPKGKYFS ELSVEDLISK NPGTLVYLLS GSETEAEARK FLTSRLPTVA AVRNNRVFFL PQSDSANLAG VEGVTKLAAA LHA
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