Gene Francci3_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3896 
Symbol 
ID3906664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4658579 
End bp4659871 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content69% 
IMG OID637881222 
ProductPhoH-like protein 
Protein accessionYP_482975 
Protein GI86742575 
COG category[T] Signal transduction mechanisms 
COG ID[COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACGAA CGCATGTCGT CGACACAAGC GTGCTGCTTT CTGATCCTGG CGCGCTGCTG 
CGGTTCGCGG AGCACAATGT CGTGCTCCCC CTCGTTGTCA TAGGGGAGCT GGAAGGCAAA
AGGAACCATC CGGAACTGGG CTGGTTCGCC CGGGAGGCAC TACGCATCCT GGACGATCTG
CGCATCCGGC ATGGTCGCCT TGATCAACCG CTCCCGCTGG ACAACGGCGG GACGCTACGG
GTGGAACTCA ATCACACCGA TGCGGCGGTG CTTCCACCGG GGTTCCGGGT CGACACGAAC
GACTCGCGGA TCCTGTGCGT CGCGATGAAC CTCGCCCGCG AGGGCGCCGA CGTCGTACTG
GTCACGAAGG ATCTCCCGCT GCGGGTCAAG GCGTCGGTGC TGGGGCTGCC CGCCGAGGAG
TACCAGGCGC TGTCCCCGGT GGACACCGGC TTCTCGGGGA TGGCCGAGCT CACCGTCACC
CAGGAGGACC TCGACCGGCT CTACTCCCGC GAGTACACCG AGATCCTGGA GGCCGCCGAC
CTGCCCTGCC ACACCGGCCT GGTCCTCACC ACCACCGGGG GGAGTGCCTC CGCGCTCGGC
CGGGTGACCG CCGACAAGCA GGTCCGGCTC GTCCGCGGCG ACCGCGACGC GTTCGGCCTG
CACGGTCGCT CCGCCGAGCA GCGGGTCGCC CTCGACCTCC TGCTCGATCC GGATGTCGGG
ATCGTCTCCC TCGGCGGTCG AGCCGGCACC GGTAAGTCGG CGCTTGCCCT GTGCGCCGGG
CTCGAAGCTG TGATGGAGCG CCGGGCGCAC CGCCGGGTGG TGGTTTTCCG CCCGCTGTAC
GCCGTCGGTG GCCAGGAGCT CGGGTACCTC CCGGGCAGCG AGAACGAGAA GATGGCGCCC
TGGGCCCAGG CGGTGTTCGA CACTCTCGGT GCGCTCGTCT CCCCCGAGGT CATCGAGGAG
ATCGTGGATC GCGGGATGCT GGAGGTGCTG CCGCTCACGC ACATCCGTGG CCGGTCCCTG
CACGACGCGT TCGTGATCGT CGACGAGGCC CAGTCCCTGG AGCGCGGGGT GCTGCTGACC
GTGCTGTCCA GGCTCGGGCA GGGGTCACGG GTGGTGCTCA CGCACGACGT GGCACAGCGC
GACAACCTGC GGGTCGGCCG GCACGACGGG GTCGCCTCGG TGATCGAGAC CCTGAAGGGC
CACCCGTTGT TCGCGCACGT CACGCTCACC CGTTCCGAGC GATCGCCGAT TGCGGCCCTG
GTCACGACGA TGCTGGAGGA TCTCGTTCTC TGA
 
Protein sequence
MPRTHVVDTS VLLSDPGALL RFAEHNVVLP LVVIGELEGK RNHPELGWFA REALRILDDL 
RIRHGRLDQP LPLDNGGTLR VELNHTDAAV LPPGFRVDTN DSRILCVAMN LAREGADVVL
VTKDLPLRVK ASVLGLPAEE YQALSPVDTG FSGMAELTVT QEDLDRLYSR EYTEILEAAD
LPCHTGLVLT TTGGSASALG RVTADKQVRL VRGDRDAFGL HGRSAEQRVA LDLLLDPDVG
IVSLGGRAGT GKSALALCAG LEAVMERRAH RRVVVFRPLY AVGGQELGYL PGSENEKMAP
WAQAVFDTLG ALVSPEVIEE IVDRGMLEVL PLTHIRGRSL HDAFVIVDEA QSLERGVLLT
VLSRLGQGSR VVLTHDVAQR DNLRVGRHDG VASVIETLKG HPLFAHVTLT RSERSPIAAL
VTTMLEDLVL