Gene Francci3_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3498 
Symbol 
ID3905232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4172131 
End bp4172472 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content65% 
IMG OID637880820 
Productputative Lsr2-like protein 
Protein accessionYP_482580 
Protein GI86742180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.494087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.552399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGA AGACCATCGT CTCGTTGATT GACGATCTCA GTGGAGAAGA GGCCGACGAG 
ACCGTCCGGT TCGGACTCGA CGGTGCGCAG TATGAGATCG ACCTGTCGGA GAAGAACGCC
ACGAAGTTGC GTGAGTCGTT GGCTCCGTTC GTCACCGCGG CTCGCCGTTC CGGCGGTCGG
GCGGCGGGTG GCCGGCGTGG TGTGCGTGCC GCTTCGCGCC GTACCGGCGG AACCGACCGT
ACCGCCGACA TTCGTGAGTG GGCGCGCAGC AACGGTTACA CGGTGAGTGA CCGGGGGCGT
ATCGCTTCCA ACATCGTCGA GGCGTACGAC AAGGCCCACT GA
 
Protein sequence
MAQKTIVSLI DDLSGEEADE TVRFGLDGAQ YEIDLSEKNA TKLRESLAPF VTAARRSGGR 
AAGGRRGVRA ASRRTGGTDR TADIREWARS NGYTVSDRGR IASNIVEAYD KAH