Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3375 |
Symbol | |
ID | 3905957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4004941 |
End bp | 4006863 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637880698 |
Product | radical SAM family protein |
Protein accession | YP_482459 |
Protein GI | 86742059 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.131592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCAAT CTTTGCCGGG AGACAACCCT GCTCTCCACC GACAGTTCCC GACGGCGTTC CCGCACTTGT CGAGATCGCT CGTTCGCGGC CGAATCCGCC CAGGTAAAAG CAATGGGTTT GGGGGAATTT TGGAACAGGT CTATCCGCAT ACCGGGGTGT GCTACACCTA CGGGAACCAC GAGCGCGTGT ACCTGATCTA CACCTATGCC TGCAACGCGA CCTGCGCACA TTGCCTGGTC CAATCGAGTC CACATCGCCG GGAGAGGTTC GACCTGGCCA CCGCGATAGA AATCCTGCGG ACGGCAGCCA GGTTCGGTCG CAGGTTCCTC GACCTGGGCG GCGGCGAGAT CATGCTTCAT CCGGAGGACA CCTGTGCGCT CGCCCGCGCC GCCACGGATC TCGGGTACTA CGTCTCCCTC AACACGAACG GCTTCTGGGC CCGCACCCCC GAACGCGCCC GTACGCTCGT GAGCCGTCTC CAGCAGGCCG GGGTCCAGGC GATCTTCCCG AGTGCGAGCG CCTTTCACCT GCCGTTCGTG CCGGTCGAGC GGCTGCGCCA CCTCCGCCGG GCCTGCGCCG ACCTCGGCAT GGTGCACGAG CTGAGCTGGG TGGCCTCCCA CCTGCCCGAC GTGGACGCCC AGCTGCTGGA CGACCTGGAC CTGGGCGGTG AGACGGTCTA CCCCAACAGC CTGACCACCG AGGGCAACGA CCCGGAAGTC ATGGCGGCTC TCACCAGGCA CTACAGCCGG TTCACGCCGG ACCGGCTCCC CGACTGTGGA AGTCTGCAAC TGGGCGTCAA CCCGCGCGGG CATGTGATAG CCACCTGCGA GATGACCAAT CTCAACGAGA AGTTCCGCGG CACCGCACTG TTCATCGGAG ATTTCACCCG GACGCCGTTC GAGCAGCTCC TGGAAGCCGA ACGGGACACG GCCGTGCTGC AGTTCCTCTA TCATAACCCG CCGGCCGCGC TGCACGATCT GCTGCTCGCC GATCCGCAGG AAGGCGGGGG ATACCGGCAC CGGTATGCGG ATCGCACCTA TCACAGCGTC ACGGACTACC TCGCCGACCT GCTGCGCGAC GAGAACGTGC CGGCCGCGGA GCGCGCCATC GCCCGCGCGT CCGATACCCG CGCGTCCCAT GCCAGCGCGT CCCATGCCAG CACAGCGGTT CCCGGCAGGT TCCACCCGGT GATCTCCCGC GCGTCCCCAC GTCTAGACCC CGCCGGGAAC CGCCGGCCCG CCGGTAATCC GCGATCCGAT TCAACGCCTG GTCGAGAGGA ATTCATCGAT GGCGGAGAAA ACGCTAACCT CCAGCTCTTT TCGTCTCCGT GTGGACCTCC TGGCTCCCCA CATCATGTCG GCCATGGAGG CTTTCGACGC CGCCACCGAC AAGGTCAGCC TGCCGGCCTC GCTCCTGGAA CTGGTCCGCA CCCGGGCCTC CCAGATCAAC GGGTGCGCCT TCTGCGTCGG CGCCCACAGC CCGGCCGCCC TCGAGGCCGG CGCGACCCAG AAGCAGCTGC TGGCCCTGCC CGTCTGGCGC GAGTCGCCGC ACTTCTCGGC ACAGGAACGT GCGGCGCTGA CCCTCACCGA GGCCATCACC CAGATGGACC GCCGGCCGGT CACGGACGAG ATGTGGGGCG AGGTCTCGGT GGTCCTCACC GAGGTGGAGC TGGCCGAACT GGTCTGGGTG ATCGCGGCGA TCAACGTCTG GAACCGCGTC GCCGGTACCG CGCGTCCCTG GCCAGTGGCC TGACATGCGG ATCGGACTCG TCGGGGCCGG CCGAATCGGC GCCGTGCACG CCCGCACGCT GGCCGACGAC CCCCGGGTGG ACGAACTGGT CATCACCGAC GTCGACCAGG AGCAGGCCGC CCGCGGGGCG AGCGCGGCCG GGGCCCGGGT CGCGGCGGAT CTCGAGGCGC TGA
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Protein sequence | MTQSLPGDNP ALHRQFPTAF PHLSRSLVRG RIRPGKSNGF GGILEQVYPH TGVCYTYGNH ERVYLIYTYA CNATCAHCLV QSSPHRRERF DLATAIEILR TAARFGRRFL DLGGGEIMLH PEDTCALARA ATDLGYYVSL NTNGFWARTP ERARTLVSRL QQAGVQAIFP SASAFHLPFV PVERLRHLRR ACADLGMVHE LSWVASHLPD VDAQLLDDLD LGGETVYPNS LTTEGNDPEV MAALTRHYSR FTPDRLPDCG SLQLGVNPRG HVIATCEMTN LNEKFRGTAL FIGDFTRTPF EQLLEAERDT AVLQFLYHNP PAALHDLLLA DPQEGGGYRH RYADRTYHSV TDYLADLLRD ENVPAAERAI ARASDTRASH ASASHASTAV PGRFHPVISR ASPRLDPAGN RRPAGNPRSD STPGREEFID GGENANLQLF SSPCGPPGSP HHVGHGGFRR RHRQGQPAGL APGTGPHPGL PDQRVRLLRR RPQPGRPRGR RDPEAAAGPA RLARVAALLG TGTCGADPHR GHHPDGPPAG HGRDVGRGLG GPHRGGAGRT GLGDRGDQRL EPRRRYRASL ASGLTCGSDS SGPAESAPCT PARWPTTPGW TNWSSPTSTR SRPPAGRARP GPGSRRISRR
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