| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3341 |
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| Symbol | |
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| ID | 3904127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3963334 |
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| End bp | 3965589 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637880666 |
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| Product | CRISPR-associated helicase Cas3 family protein protein |
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| Protein accession | YP_482427 |
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| Protein GI | 86742027 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.127091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.741402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGCAC ACAGTATGAA CACGTCCGGC ATGCGCCACC GACTTGTCGA TCATCTTGAG
GGCACCGCAC TGCTCGCTGA GCGTTTCGCC GCGGTGTTCG GTGCCGGTGA GGTGGGCCGC
TTCGCAGGAT TGGCGCATGA CGTGGGCAAG GCATCCTGTG CCTGGCAGGA CGGTCTGTTG
CGGGCGGAGG CGACGGGCGT CCGCGTAGGT GAAGATCATA AAACGTTGGG CGTTCTTCTC
GCGGAGCGGC GTGGGGCCTT CCCGGTGCTC GGTTTGCCTT TGCATGGTCA TCACGGCGGG
CTGACCAATC CGTCCGAGGT ACGCTCGATG ATCAAAGATC GAAGCAAACC GCGAGATGTA
CAGGACCGGG CGGAGGCGGA GGCAGCGCTA CGTCCGCTGC TTCCTGGGTT GTTCGACGGG
CCGCCGGTGC GTCTCCCGGT CGGGTTCGAT GAGCCGGGTA CCAGCGAGAT GCTGATGCGC
TTCCTGTTCA GCGCGTTGGT CGACGCGGAC GGGCTGGACA CGGCGGCTCA TCGGTCCGGT
GGCCAGCCGC AGGTTGCGGC TCCCGCGGAC ATGGCGATGT TGTGGGATCG GTTCGTCGGT
CGGCGTAAGG AGATGCTGGC TGGTCGGCCC CCCGCCCCGG CTGCGGACCG GTTGCGCGGT
GAGGTGTATG AAGCGTGCCT GGCCGCGGCG GCCGGTCCGA CGGGAATCTA CCGGCTGCCG
GCGCCGACGG GATCGGGGAA GACGATCGCG GCGGCCGGGT TCGGCCTCCG GCATGCCCTC
GAGCAGGGAA AGTCCAGGGT GATCGTCGCG GTGCCCTTCA TCACGATCAC TGAGCAGAAC
CATGCAGTGT ACCGGCGTCT GTTGGACCCG GTCGGGGCGG GCAAGGGCGC TCCGGTGGTG
TTGGAGCATC ACTCGAACGT CACTGTCGAT GACGACGGTC CGGCGCAACG GTGGCGCAGG
CTGGCGGCGG AGAACTGGGA TGCGCCATTC GTCGTGACGA CCACCGTGCA GCTGTTCGAC
TCGCTTTTCG GCCGCAAGCC GGCGGCAATG CGCAAGGTGC ACCGTCTCGC CAACTCCGTG
ATCGTCCTGG ATGAGGTGCA GGCGTTGCCG GCGCCGCTGC TTCTCCCGAT CGTGGACGGG
TTGCGGACGC TGACGGCGCG GTTCGGGACG ACGGTGTTAC TGGCATCGGC GACACAGCCG
GAGCTGTGGG CGCTGGATCC GTTGGAGTCG ATCACGCCGA TCGAGGTGAT CTCCAATCCG
GAATCCTTGT ATAAGACGTC ATGTCGGGTT CGGTACGAGT GGTGGCCCGA TCCGAAACCG
ACGTTGGAGC AGGTCGCTGA TCGGGTTGCC GATCCGGCGG CTGCCGGTGC AGACCAGTCG
CTGACGATCG TGAATACGGT CGCGAATGCC CGCCAGATGC GGGACCTGGT TGCTGCCCGT
GTACCGGCGA CCACCCCGGT GCTGCATCTG TCGACGGCAA TGTGCCCGGC GCACCGTCGA
GAGGTACTCG CGGAGGTGAA GGAACGGCTC ACCGCGCGGC TACCCGTCCG GCTGGTGAGC
ACCCAGCTGA TCGAGGCCGG CGTCGACCTG GATTTCCCAG TGGTGTTCCG GGCGATGGCC
CCGGCGGACT CGTTGCAGCA GGCCGCGGGC AGGGCGAACC GGGAGGGGCA TCTCGGCCCG
AAAGGCGGCT TGGTGGTCGT ATTCGACCCG GCCGATGGCG GCCGTCCACG CTCCTACGAC
CTTCCCGTCG GCATCACCGC CCGGTACATC GGACTGGGCC GCGCCGACCC AGATGATCTC
AAGGCACTAC GCCTCTACTA CCACAGCTAC CTGCAAAATC CGCGGGTGTC AGGTAGGGAT
AGCAGGGGAG CGGCGGTGCA GATCAGCCGA GCGGCCCTCG ACTTCCGCGC GGTAGCGGAA
GGTCCGAAGC GCACAGGGGA AGACCCGAGA CCGGACAGAT CGAAGGCATT CCGAATGATC
GATGAGGACA CCGTCCCGGT CGCCGTGCCT TACCAGGGTG AGGAGGAACG GGTCCGTCAG
CTCGTCGAGC GGATTCGCAT GGTCCCGCTT CCCGAGCCTC GCCTCTTCCG CGATCTTCAA
CCCTACTTGG TCATGATCCA ACGCCGCACC CGGGACCGCG CCGACGTCGC CACGCTGTGC
CAGCCCGTCT TCGGGGACCT CGTCGAATGG GCCGGCAGCT ATGACAAAAA CACCGGCATC
GTTCTTGAAC CGTCAGGAGA GGAGTTCATC GCATGA
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| Protein sequence | MWAHSMNTSG MRHRLVDHLE GTALLAERFA AVFGAGEVGR FAGLAHDVGK ASCAWQDGLL
RAEATGVRVG EDHKTLGVLL AERRGAFPVL GLPLHGHHGG LTNPSEVRSM IKDRSKPRDV
QDRAEAEAAL RPLLPGLFDG PPVRLPVGFD EPGTSEMLMR FLFSALVDAD GLDTAAHRSG
GQPQVAAPAD MAMLWDRFVG RRKEMLAGRP PAPAADRLRG EVYEACLAAA AGPTGIYRLP
APTGSGKTIA AAGFGLRHAL EQGKSRVIVA VPFITITEQN HAVYRRLLDP VGAGKGAPVV
LEHHSNVTVD DDGPAQRWRR LAAENWDAPF VVTTTVQLFD SLFGRKPAAM RKVHRLANSV
IVLDEVQALP APLLLPIVDG LRTLTARFGT TVLLASATQP ELWALDPLES ITPIEVISNP
ESLYKTSCRV RYEWWPDPKP TLEQVADRVA DPAAAGADQS LTIVNTVANA RQMRDLVAAR
VPATTPVLHL STAMCPAHRR EVLAEVKERL TARLPVRLVS TQLIEAGVDL DFPVVFRAMA
PADSLQQAAG RANREGHLGP KGGLVVVFDP ADGGRPRSYD LPVGITARYI GLGRADPDDL
KALRLYYHSY LQNPRVSGRD SRGAAVQISR AALDFRAVAE GPKRTGEDPR PDRSKAFRMI
DEDTVPVAVP YQGEEERVRQ LVERIRMVPL PEPRLFRDLQ PYLVMIQRRT RDRADVATLC
QPVFGDLVEW AGSYDKNTGI VLEPSGEEFI A
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