Gene Francci3_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3334 
Symbol 
ID3904120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3951626 
End bp3952516 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content74% 
IMG OID637880659 
Producthypothetical protein 
Protein accessionYP_482420 
Protein GI86742020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0147836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCG TCAAAACGTT CGTGATGGCT GGTGCCGTTC TGTGTCCGCT GATTCTTTCT 
GCTGCCGTGG CCCGCGCGGC AACGCCAGGC TGGACGAATG GGCAGGGCGC TGTGAGCGGT
TTCGCCGATG TCGATAGGGC CGACAGGGCG CTTGTCGGTT CGGTGGAGTC GACGGGCGCT
GGTCGCGCCG CGGCCGGATC GCCGGCGGCT ACAGCCGCGG CCGCGTGCCG CTGGCTGGTG
GGCTATGCGG CCGCCGAGCA GCTGGTGAAG CCGCGACCGG AGTCCATCGG CCTGGTCGAC
GTCGAACGGG TCGAGGCGGA CGGTGGCCGG TCCCGGATGT ACGCGCGGAT CTGCGACGGC
CGGATCGTCG GGTGGGCGTG GCTGCGGGTT CCGAACGTCT CCGGCGCGGT GGCGTCGGCG
GCGCGGGAGG TGCGGCGCCG GCTGCCGGCT CCACGCGGCC GGTTCTCCCC CGATGTGGCG
GGGGCGGCGG TGGTGCGGGT GTCGGTGTGG TTCGCGGTGC CGGGGCAGTG GTCGGCGGTG
TCCGCGTCGG CGCAGATCCC GGGGGCGTCG GTGACCGTGA CCGCGGCCCC GACGGTGTTG
CGGTTCGCCC CGGGCGATGG CTCGCCGCCG GTGTCCTGTG TCGGGCCGGG CCCGGTGTTC
GTCCCCGGCA CACCGGAGCC GGCGCGTCCC CCGGCCTGCT CATACACCTA TCGGGACGCC
TCCACGGCCG CGCCGGGCGG CCGGTTCTGG CCCGGGGTGC TGGCCATCGA CTGGACCGTG
GCCTGGAGTG CGAGCGACGG CGAACACGGC ACGCTTCCCG GTATCACGAC CCGGGCGGAG
GTGCCGGTCG AGGTGCGGGA GATCGAGGCG GTTGAGAGGG CGGGGCGATG A
 
Protein sequence
MSPVKTFVMA GAVLCPLILS AAVARAATPG WTNGQGAVSG FADVDRADRA LVGSVESTGA 
GRAAAGSPAA TAAAACRWLV GYAAAEQLVK PRPESIGLVD VERVEADGGR SRMYARICDG
RIVGWAWLRV PNVSGAVASA AREVRRRLPA PRGRFSPDVA GAAVVRVSVW FAVPGQWSAV
SASAQIPGAS VTVTAAPTVL RFAPGDGSPP VSCVGPGPVF VPGTPEPARP PACSYTYRDA
STAAPGGRFW PGVLAIDWTV AWSASDGEHG TLPGITTRAE VPVEVREIEA VERAGR