| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2988 |
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| Symbol | |
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| ID | 3905484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3539142 |
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| End bp | 3539891 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880308 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_482074 |
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| Protein GI | 86741674 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.382188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGG GAAAGCATCG GAAACGTTCC ACCCGGACCC GGGGCGCCGT TGTCGCCGCC
GTCGGTGTGA TCGGCGCCGG CGCCGGCATG TTCGCCACCG CGAGCCCGGC CAGGGCCGCC
ACCACGGTCC CCGATGTGAC GATCGCCAGC GCGGCCGCGA ACGCGGGACT GCCCGGCTGC
CGCGGCGTTC CGCTGGCCAC CTGGGTCGCG GTGGCTCTTG CGGAGTCCGG CGGCAACCCC
TACGCCCACG CCACCTACGG CGAGGACTCG CGCGGCCTGT GGCAGATCAA CATGCGGGCC
CACGCCGGCT GGGTGGGTAA CCGCAACCTC TACGACCCGG CCGTCAACGC CTGGGCGGCG
AAGAAGGTCT GTGAAGGCCA GGGCATCACC GCCTGGAGCG CCTACACCAA CGGCCTGCAC
TACCGCTACC TGGCCCGGGG ACAGGCGGCG GCGGCGGCCG TCTCGCGCGG CGTGCGGTTC
ACGAACATCT CCTACTCCTC GCTGGCTGCC CCGGTGCGTG CGGCCGTGGT GGCACCCGCG
GCCCGCTACC CGTCGCTGGC CGTCGGCCTC GGGTTCCGCC TCGACGTCCA CCAGATCCAG
AAGAGGCTCG CCAGCCTTGG CTACCCGATC AGCGTGGATG GGAAGTTCGG GTACCAGACC
AACCACATGG TCAAGGACTT CCAGCTGAAG CACGGTCTGG TGGTTGACGG GATCGTCGGA
CCGCAGACGC GGGCGAAGCT CGGGATCTGA
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| Protein sequence | MAKGKHRKRS TRTRGAVVAA VGVIGAGAGM FATASPARAA TTVPDVTIAS AAANAGLPGC
RGVPLATWVA VALAESGGNP YAHATYGEDS RGLWQINMRA HAGWVGNRNL YDPAVNAWAA
KKVCEGQGIT AWSAYTNGLH YRYLARGQAA AAAVSRGVRF TNISYSSLAA PVRAAVVAPA
ARYPSLAVGL GFRLDVHQIQ KRLASLGYPI SVDGKFGYQT NHMVKDFQLK HGLVVDGIVG
PQTRAKLGI
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