Gene Francci3_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2643 
Symbol 
ID3906316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3118751 
End bp3119530 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content72% 
IMG OID637879968 
Productphosphatidylinositol 3- and 4-kinase 
Protein accessionYP_481734 
Protein GI86741334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.654173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.264962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCT CCGCGGCGAG TTCCACTCCG GGGTGGCGAC CGCCACTGCA TCCGATCGAC 
GGGGGTGGCC TCGACGCCCC CGCCGCCCTC GACCTCCTTC GCCGCGGTGA CCTCGAGATC
ACCGCCCGGC TGGTCGACGC GAGCAACACG ACGCTCTGCT GCGACATCTG CGCCGACGGG
GTGACCGGCC GCTGCGTCTA CAAGCCGGTC CGCGGCGAAC GCGCCCTGTG GGACTTCCCG
GACGGCACCC TCGCCGCCCG CGAGCTGGCC GCCTACGAGG TCTCCGAGCA GCTCGGGCTT
GGCATCGTCC CGCCCACCAT TCTGCGTGAC GGCCCGTTCG GCGAGGGCAT GGTGCAGCTG
TGGATCGACA CCGACGTCAC CGTGGACCTG GTGGCGCTGA CCCGGTCCGA CGACTCCCAG
CTGCGCCGGA TCGCCCTGTT CGACGTCGTC ATCAACAACG CCGACCGCAA GGGTGGGCAC
CTGCTGCCGG CGCCCTCCGG CCGGATTCAC GGCATCGATC ACGGTGTGAC CTTCCACACG
GACGGCAAGC TGCGCACCCT GCTGTGGACC TGGCGGGGAA GGCGGCTCGA CGCCGAGGAG
ACCGCCTTGC TCGACGACCT GCGTGAGGCG CTCGCGGGCC CCTTCCGGGA CCGGCTCGAG
GAGCTGCTCA CGGTCACCGA GGTCGACGCC CTCACCGTGC GGGTCGACGG GCTTCTGGCC
GAGGGCCGGT TCCCGTTGCC CTCGGGGGAC TGGCCGGCGA TCCCCTGGCC GCCGTTCTGA
 
Protein sequence
MGVSAASSTP GWRPPLHPID GGGLDAPAAL DLLRRGDLEI TARLVDASNT TLCCDICADG 
VTGRCVYKPV RGERALWDFP DGTLAARELA AYEVSEQLGL GIVPPTILRD GPFGEGMVQL
WIDTDVTVDL VALTRSDDSQ LRRIALFDVV INNADRKGGH LLPAPSGRIH GIDHGVTFHT
DGKLRTLLWT WRGRRLDAEE TALLDDLREA LAGPFRDRLE ELLTVTEVDA LTVRVDGLLA
EGRFPLPSGD WPAIPWPPF