Gene Francci3_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2226 
Symbol 
ID3906365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2599640 
End bp2600197 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content70% 
IMG OID637879557 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_481323 
Protein GI86740923 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.572683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGA CCACGATCAT TCCCCTTCTC ACGACGGACC GGCTCGTCCT GCGGCCCATC 
CACAACGACG ACGTCGCCGG CTACACCGAG ATCTGGTCCG ATCCCGAGTT CACCCGCTAC
TTCCACCGGC CGACCGACCC GGACGGCGTC TGGCATGCCC TGGCCGGCTG CATGGGCTGC
TGGGTGCTGA CCGGCGTAGG TCCGTGGTCG GTTGTCGAGA AGGCGAGCGG GCAGCTCGTC
GGCCAGGCGG GGCTGTGGAC CGAACCCGGC TGGCCGGGCA TCGAGGCCGT CTGGTTCCTG
CGCCGGGACC GCTGGGGGCG CGGCTATGCC ACCGAGGCCG CCACCGCGGC ACTGACCTGG
GTGTTCGCCC AGCGCCCCGA CCTCACCGAG GTCGTCTCGG TCATCGTCCC GGCCAACGCC
GCGTCTGTCC GGGTCGCCGA ACGCCTCGGC ATGGCATACG TCCGCAGCGA GTTCCTCCAC
GACGAGGCCC ATGCCGTCTA CGCGGTCAGC CGGGCCGGCT GGGTCACCCC AACCACTCGA
CAGCAAGCTT ACGGATAA
 
Protein sequence
MSLTTIIPLL TTDRLVLRPI HNDDVAGYTE IWSDPEFTRY FHRPTDPDGV WHALAGCMGC 
WVLTGVGPWS VVEKASGQLV GQAGLWTEPG WPGIEAVWFL RRDRWGRGYA TEAATAALTW
VFAQRPDLTE VVSVIVPANA ASVRVAERLG MAYVRSEFLH DEAHAVYAVS RAGWVTPTTR
QQAYG