Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2130 |
Symbol | |
ID | 3905520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2499613 |
End bp | 2500761 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637879465 |
Product | transposase, IS4 |
Protein accession | YP_481231 |
Protein GI | 86740831 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCAGCCG TGGACAGCGA GCGGCTGACC GACCGTATTT CGATCGGTGT GCTCGCCAGA ATCGTTCCCC GGGATCTCGT CGATGAAGCG CTGGTGGAGA CGAAACGGCA GGAACGGCGT ACCAGGCTGC TGCCAGCCCG GGTCATGGTG TACTTCACGA TGGCGATGTG CCTCTTCTTC GACGATGACT ACGAAGAAGT CATGCGTAAA CTCGCCGGTG CGTTGAGGTG GCTGGGGAAC TGGAAGGGTG ACTGGCAGGT CCCAACTAGC GGGGCGATCT CGCAGGCACG GATCAGACTC GGCGCCGCGC CTCTGAAACT GTTGTTTGAA CGTGTCGCGG TGCCGGTCGC GGGGCGGGGT ACCAAGGGCG CATGGCTGCG TTCCCGGCGG CTGACGGCGA TCGACGGGTT CTTCCTCGAC GCCGCGGACA CCCCCGAGAA CGTGGCCAGG TTCGGACGGC ACACCAACGG ACACAAGGCC AGCGCCCTGC CACAGGTCCA TGTTGTCGCG CTCGCCGAAT GCGGCACGCA CGCGATCGTC GCCGCCGCGG TCGGCCCCCG GGCGAGCGAC GAACGCACCC TCGCCGCCAC TCTCTTCGAC GCCTGCGAAC CCGGGATGCT CCTCACCGCC GACCGCAACT TCTACGGCCG CGACCTGTGG CACCAGGCAC TTGACACCGG CGCGGACCTG CTCTGGCGAG TCAGGTCCAA CCTCGCGCTA CCGGTCATCC AACCGCTCCC TGACGGCTCC TACCTCTCCA TTGTCATCAA TCCGAAACTA AGCGGGAAAC GGCGGGAACA GCTCATCGTC GACGCCCGCG CGGGCCGCGA TTTTCCCGAG GACTACGCGA CACCCGTCCG CGTCATCGAA TACACGGTGC CCGACCGCAC CGGAGCCGGC ACCGGAGAAC TGATCTGCCT CATCACCAAC ATCCTTGACC AAACCGATAT ATCCGCGGTG GAACTCGCCA CGGGCTACCA TGAGCGGTGG GAAATTGAAA GAATCTTCGA TGAGGTGAAG ACCCACCAGC GGGGCGAAGC CCGCTCGGTC TCAATAGGTC AGTGCACCAC GTATGAATCC GGTCATAGAT CGGGTCTGGT AGGAACGTGG CCTACTGATC TGGAGGTTCG GTGCGCGGCG CGGTGTTGA
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Protein sequence | MPAVDSERLT DRISIGVLAR IVPRDLVDEA LVETKRQERR TRLLPARVMV YFTMAMCLFF DDDYEEVMRK LAGALRWLGN WKGDWQVPTS GAISQARIRL GAAPLKLLFE RVAVPVAGRG TKGAWLRSRR LTAIDGFFLD AADTPENVAR FGRHTNGHKA SALPQVHVVA LAECGTHAIV AAAVGPRASD ERTLAATLFD ACEPGMLLTA DRNFYGRDLW HQALDTGADL LWRVRSNLAL PVIQPLPDGS YLSIVINPKL SGKRREQLIV DARAGRDFPE DYATPVRVIE YTVPDRTGAG TGELICLITN ILDQTDISAV ELATGYHERW EIERIFDEVK THQRGEARSV SIGQCTTYES GHRSGLVGTW PTDLEVRCAA RC
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