Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2117 |
Symbol | |
ID | 3905507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2483462 |
End bp | 2484322 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637879452 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_481218 |
Protein GI | 86740818 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.115712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.273152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAACG TCCTGGCAGC GCCTCCGACG CTGTCTGACC GGCCCGCGCC GCGTCTCGTC GCCCGCGCGT CGACGATCCT GCTCACTGGC ATCCTCCTGG TGATCGCCCT GGCGGTGACG GCACCGGGGA TCCTCACGGG CGCCTCGCCG ACCGTCGTCG ACCCGTCAGG CGTGCTGGCA GCGCCGAGCG GCTCGCACTG GTGTGGGACC GACCAGCTCG GGCGGGACGT GTGCGCCCGG GTGCTGCATG GTGCCCGGGC GTCCCTGCTG CTCGGCGTCG GCTCCGTCGC GCTGGCCGTG GGGATCGGTG CGGCTCTGGG CCTCGCGGCG GCGCTCGGCG GGCGCCTCGT CGACCTGGTG CTCACCCGGG TGATGGATGT GCTGATCGCG ATACCCCCGT TGATGCTCGC CCTCCTGGTC ATCGCGGTGC TCGGGCCCGG CAGCGGCAGG ACCATGATTG CCACGGTGGT GGCGCTGACG CCTCTGTACG GCCGCCTCGT CCGCGCCGAG GCGATGGTCG CCCGCCGAGC GGGTTACGTC GAGGCGGCCC GCGGACTCGG CGTCGGCCGG ATGGCGCTGG TCGTGCGCCA CGTGCTGCCA AACGCGCTCG GTCCGGCGCT GGCGCTGGCG ACCACGGGGG TCGGCTCGGC CATCGTGTAC GTGGCGGGGC TGAGCTTCCT CGGGTTGGGC CCGCAGCCCT CCACCGCGCA GTGGGGTCTG ATGCTGGCGG AAGGCCGGGA CTTCCTACGG TCCGCGTGGT GGGTCGGGGT GTGCCCGGGT GCGGCGCTCG CGCTGACCGT GCTCGCCGTC CAGGCCGCCG GCCGCCGGGC CCAGCAGCGG CTTGTCCGGC GCGGCGGATG A
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Protein sequence | MTNVLAAPPT LSDRPAPRLV ARASTILLTG ILLVIALAVT APGILTGASP TVVDPSGVLA APSGSHWCGT DQLGRDVCAR VLHGARASLL LGVGSVALAV GIGAALGLAA ALGGRLVDLV LTRVMDVLIA IPPLMLALLV IAVLGPGSGR TMIATVVALT PLYGRLVRAE AMVARRAGYV EAARGLGVGR MALVVRHVLP NALGPALALA TTGVGSAIVY VAGLSFLGLG PQPSTAQWGL MLAEGRDFLR SAWWVGVCPG AALALTVLAV QAAGRRAQQR LVRRGG
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