| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2009 |
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| Symbol | |
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| ID | 3906725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2360244 |
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| End bp | 2361959 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637879345 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_481112 |
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| Protein GI | 86740712 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACTTG TGCACGATAG GCCGGCCGGG CACACGGACC CGCCGGCGGG CGAGCTCCCG
CCCAGGGTTG TGAAAACCCT GGCGCAGTAC CTGCGGACGA CGTCGCACAA GGACATCGCG
CTGCTGTACT TCATGACCTC GCTGGTATTC TTCGCGTTCG CTGGAATCCT GGCGATGCTC
ATCCGGGCCG AGCTCGCCCG ACCGGGCCTG CAGTACCTGT CGAACGAGCA GTACAATCAG
GTGTTCACGA TGCACGGCAC GCTGATGCTG CTGATGTTCG CGACGCCGAT CGCGTTCGCG
TTCGCGAACT ACCTGATCCC GCTGCAGATC GGCTCGCCTG ACGTGGCCTT TCCACGGCTG
AACGCGTTGT CGTTCTGGCT GTTCCTGTTC GGCAGCCTGA CGGTCACCGC GGGCTTCCTT
ACGCCGAACG GCGCCGCCTC CTTCGGCTGG TTCGCCTATA CGCCGCTGTC GAACGCTGCC
TACTCGCCGG GCATCGGCAG TGACCTGTGG GTGCTGGGTC TGACCGTCTC CGGTCTGGGT
ACCATCCTGG GCGCGGTCAA CTTCATCACG ACGATCCTTT GCCTGCGGGC GCCCGGCATG
ACGATGTTCC GGCTGCCGAT CTTCTGCTGG AACCTGCTGG TGACCTCGAT CCTGGTTCTG
GTCGCCTTCC CGGTGCTCGC GGCCGCGCTG CTCGCCCTGG AGTTCGACCG CCGGTTCGGC
GCGCACATCT TCGACCCGGG TAACGGCGGC GCAGTCCTCT GGCAACACCT GTTCTGGTTC
TTCGGGCATC CCGAGGTGTA CATCATCGCC CTGCCCTTCT TCGGGATGAT AACGGAGATC
ATCCCGGTGT TCTCCCGCAA GCCGTTGTTC GGCTACAAGG GACTGGTCTA CGCGACCATC
GGCATCGGGG CGTTGGCGAT CGCCGTGTGG GCGCATCACA TGTACGTCAC CGGCGCGGCG
CTGCTGCCGT TCTTCGCTTT CCTGACGTTC CTGATCGCGG TGCCAACCGG GGTCAAGTTC
TTCAACTGGA TTGGCACGAT GTGGCGCGGA CAGCTCACCT TCGAGGCGCC GATGTTGTTC
GCCGTCGGCT TCCTGGTGAC GTTCCTGTTC GGTGGTCTGA CCGGTGTCCT GCTGGCCAGC
CCGCCGATCG ACTTCCACGT CTCGGACAGC TACTTCGTCG TCGGCCACTT CCACTACGTC
GTCGCCGGCC TGTTGTTCGC CGGCTTCGGC GGGGTGTACT TCTGGTTCCC GAAGGTCACC
GGCCGGATGT TGAACGAGCG GCTCGCGAAG GTGCACTTCT GGACGATGTT CTTCGGCTTC
CACCTGACCT TCCTGGTGGA TCACTGGCTC GGCGTCAAGG GCATGCCGCG CCGATACGCC
GACTACGGCC CGGACGACGG CTTCACCACG CTGAACACCA TCGCCACCGC TGGCAGCTCC
CTGCTTGCGC TGTCGACCCT GCCGCTGCTG TACAACCTGT GGTGGTCGTA CCGGAAGGGT
CGGATCGTGA CGGTGGACGA CCCGTGGGGC TTCGGCAACT CGCTGGAATG GGCGACGTCC
TGCCCACCGC CGCGGCACAA CTTCACCTCG CTACCGCGGA TCTGCTCCGA GCGGCCCGCC
TTCGACCTGC ACTACCCGCA GGCGGCCGGC GCGGTCGACT ACCACGCCAC CCCCGAGCTC
ACCCCGACCC ACGACACCCC GGAGCTGAAT ACCTGA
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| Protein sequence | MTLVHDRPAG HTDPPAGELP PRVVKTLAQY LRTTSHKDIA LLYFMTSLVF FAFAGILAML
IRAELARPGL QYLSNEQYNQ VFTMHGTLML LMFATPIAFA FANYLIPLQI GSPDVAFPRL
NALSFWLFLF GSLTVTAGFL TPNGAASFGW FAYTPLSNAA YSPGIGSDLW VLGLTVSGLG
TILGAVNFIT TILCLRAPGM TMFRLPIFCW NLLVTSILVL VAFPVLAAAL LALEFDRRFG
AHIFDPGNGG AVLWQHLFWF FGHPEVYIIA LPFFGMITEI IPVFSRKPLF GYKGLVYATI
GIGALAIAVW AHHMYVTGAA LLPFFAFLTF LIAVPTGVKF FNWIGTMWRG QLTFEAPMLF
AVGFLVTFLF GGLTGVLLAS PPIDFHVSDS YFVVGHFHYV VAGLLFAGFG GVYFWFPKVT
GRMLNERLAK VHFWTMFFGF HLTFLVDHWL GVKGMPRRYA DYGPDDGFTT LNTIATAGSS
LLALSTLPLL YNLWWSYRKG RIVTVDDPWG FGNSLEWATS CPPPRHNFTS LPRICSERPA
FDLHYPQAAG AVDYHATPEL TPTHDTPELN T
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