Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1931 |
Symbol | |
ID | 3904293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2270488 |
End bp | 2271531 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637879268 |
Product | LysR family transcriptional regulator |
Protein accession | YP_481035 |
Protein GI | 86740635 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.846594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGCGG GAGGTACCAT GGAGAGCAAG ATCGATTTCC GATACCTCGT CTCTTTCTTG GCGATCGCAG AAGAACTCCA CTTCGGCCGG GCCGCGGCCA GGCTCCATCT GGCCCAGCCC TCTCTCAGTC AGCAGCTCCA GCGTCTCGAA CGTGACATCG GTGTCGAACT GGTCAACCGG ACCTCCCGGG AGGTCCGGTT GACCCCGGCG GGCCGGGCCT TCGAGATGGA GGCACGACGT CTGCTGGAAC AGGCACGACA GGCGGTCCGG GCGGCCAGGG AGGCCGCTTC CGGCCGGACC GGTCGGATCT CCATCGGGTT CAACTTCCCC GCCGGGGAAC GGGTCCTCCA ACCCACCCTG CTACGGCTCA ACGCTGACTA CCCGAACGTC TCGACCACTC TCTGGGAGGC TCGCAGCGGC CCCCAGCTGT CCGCCCTCAC CGCGGGAAAA CTCGACGTCG CGCTCGTGTT CGCCGGGCCT CTCGCGGCCC AGTTGCGGTC CCATCGGGTC TTCACCGTGC CGCTGGTGGC GCTCGTCGGG CGAAACCATC CGTGGGCGGA CCGTCGCCAG GTCTCGTTCC GGGAGCTGGC GGGCCAGGGA TGCGTGCTGT TCCGCCGGGA ACAGAGCCCG GCGATGCACG ACGCTATCCT CGCCGCCGCC GACCGCTGTG GCATCCGCCT GAGTGTGGCA GAGGAGGTCG ACGACTCCGG CGCCACCGGC ATCGTCGTCA CGACCAGGCC GGTGGTGGCC TTCGCGTCGG CGGATCGCGG CGCGCATGTG CCCACGAAGG GCCCCGTCGC GGTGCGGCTC GTCGACCCGG TACCGACTGT CGGCGCGTAC GCGGTCTGGC GTCCGGATCC GCAGCCCGTC GTCACGGCCT TCCTCAACAG CCTCGACGCC GCCGGGCCGT TCCTGGGACC GCCGTCCCTG GATCCGTCCA GGTCGGACGA GCCGGCGACC GGCCCGGCAC CAAGGCCGCG GAGCACGCCC GCGGCCTTGA CCTCGGTGAC CGCCGGTGCG TGCTCGCTGA TCCGGCAGGC CTGA
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Protein sequence | MSAGGTMESK IDFRYLVSFL AIAEELHFGR AAARLHLAQP SLSQQLQRLE RDIGVELVNR TSREVRLTPA GRAFEMEARR LLEQARQAVR AAREAASGRT GRISIGFNFP AGERVLQPTL LRLNADYPNV STTLWEARSG PQLSALTAGK LDVALVFAGP LAAQLRSHRV FTVPLVALVG RNHPWADRRQ VSFRELAGQG CVLFRREQSP AMHDAILAAA DRCGIRLSVA EEVDDSGATG IVVTTRPVVA FASADRGAHV PTKGPVAVRL VDPVPTVGAY AVWRPDPQPV VTAFLNSLDA AGPFLGPPSL DPSRSDEPAT GPAPRPRSTP AALTSVTAGA CSLIRQA
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