Gene Francci3_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1869 
Symbol 
ID3906144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2203772 
End bp2204269 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content71% 
IMG OID637879207 
Producthypothetical protein 
Protein accessionYP_480974 
Protein GI86740574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.557561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.202101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCGGG TACCGGGGCG GGGTGGGAAC GGCCGGGTGA GTGTGGTCGG GATGGTCTGC 
TACCGGCCCG GCTGGCGTCC GCGGCTGCTC TACCGGGCCC GGACCTGGCG GGGTGGTGGC
GGGCGCAGGG GGATCGGCTG GGAGGACTGC CGGGATCTGC TGGCCGCCGC GCATGCGCAG
CTTCCCGGGG GCCGGCTGGT GCTGGTCTGG GACCGGGTGA ACATCCACCG GCAGACGGAG
ATGACCACGT TCCTGCGGGA GCACGCGGGC TGGGTGAGCG CGGTGCTGCT ACCGGCCTAC
GCCCCTGAGC TGAACCCGGC CGAGGGGGTG TGGTCACAGC TCAAGCGCAC CGCTGTGGTG
AACCTGGCTG CCCGCGCCCT CGACGAGGTC TGCCAGGCGG TCAAGCACGG GCTGAAACGA
ATGCAGTACC GGCCCCCGTT GCTGTTGGGG TTCCTCGCCG AAACCGGTCT GGTCTGGGAA
GAGCTATGGT CAACATGA
 
Protein sequence
MVRVPGRGGN GRVSVVGMVC YRPGWRPRLL YRARTWRGGG GRRGIGWEDC RDLLAAAHAQ 
LPGGRLVLVW DRVNIHRQTE MTTFLREHAG WVSAVLLPAY APELNPAEGV WSQLKRTAVV
NLAARALDEV CQAVKHGLKR MQYRPPLLLG FLAETGLVWE ELWST