Gene Francci3_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1346 
Symbol 
ID3906559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1616068 
End bp1617240 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content74% 
IMG OID637878679 
ProductAFG1-like ATPase 
Protein accessionYP_480452 
Protein GI86740052 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAGC GTCTCGTCGA TCGCCGGCCG ATTGTGCCGC CCGGGGACCT GGTCGCGGCG 
CTCGTCCCGC CGCCCCGGTT CGACGCGGTC CGGTTCGCCG GCTACCTGCC CGATCCGGCC
GAGCCGAGCC AGGCCGCCGC GGTCATGGCG CTGTCCGCGT TCGCCGACCG GTTGACCGCC
TCGTCCGGGC GGTCCAGCCG TTCAGATCGT TCCAGCCGTT CCAGCCGTTC CAGGTATGCG
GGCCATTCTG GGAAGGGCGG CCTGTGCGGG CTCCTGACCC GGGGGACGGG GGTGTCGGGT
CCGTTCGGAT CGGGCCCGCG CCGTTCCGGA AGCGCCGGTC CGTCCGGAAT GCGGCCGGGG
GTGTACCTCG ACGGCGGCTT CGGCGTCGGT AAGACCCACC TGCTCGCCTC GCTGTGGCAC
GCCGTGCCCG GTCCGAAGGC GTATGGCACG TTCGTAGAAC TGACCTCCCT GGTCGGCGCG
TTGGGATTCG CCGCGACCGC GCGGGCCCTC GCGGGCCTGC GCCTGGTCGC GATCGACGAG
TTCGAGCTCG ACGATCCCGG CGACACGGTG CTGGTGTCCA GCCTGCTGAC TCGGCTCGTC
GAGGCCGGTG TCCACCTGGC CGCGACGAGC AACACCCAGC CGGAGGACCT CGGTGCCGGT
CGGTTCGCCG CCGCCGACTT CCGCCGTGAG ATCCAGGGTC TGGCGGCCAG CTTCGACATC
CTCCGGGTGG ACGGGGAGGA CTATCGGCAC CGGGGTCTTC CGGCCGCGCC CCCGCCGTGT
ACCGACGACG AGGTCGGCGC GCGGGCGGCT GCCGTGGAGG GGGCGACCGA GGACGGATTC
GCCGCGCTGT GCGAGCACCT CGCCGGGCTG CACCCCTCCC GGTACGGCGC GCTCGTGGCC
GGGGTCACCC TGGTCTGCCT GCACCGGGTC GTGCCGGTCG AGGATCAGGC GGTGGCGTTG
CGGGTGGTGG TCCTCGCCGA CCGGCTCTAC GACCGGTCGA TCCCGGTCGT GGCCTCCGGC
GTGCCCTTCG GGGAGCTGTT CGGAGCGGAG CTGCTCGCCG GGCCGCATCG CAAGAAGTAC
CAGCGGGCCA TGTCCCGGCT GAGCGCGCTG GCTCGGGACG CCGCGGCGGG GAACGACACC
GCGGGCCGCG TCGCCGGGAT GCTGCCCGGC TGA
 
Protein sequence
MAQRLVDRRP IVPPGDLVAA LVPPPRFDAV RFAGYLPDPA EPSQAAAVMA LSAFADRLTA 
SSGRSSRSDR SSRSSRSRYA GHSGKGGLCG LLTRGTGVSG PFGSGPRRSG SAGPSGMRPG
VYLDGGFGVG KTHLLASLWH AVPGPKAYGT FVELTSLVGA LGFAATARAL AGLRLVAIDE
FELDDPGDTV LVSSLLTRLV EAGVHLAATS NTQPEDLGAG RFAAADFRRE IQGLAASFDI
LRVDGEDYRH RGLPAAPPPC TDDEVGARAA AVEGATEDGF AALCEHLAGL HPSRYGALVA
GVTLVCLHRV VPVEDQAVAL RVVVLADRLY DRSIPVVASG VPFGELFGAE LLAGPHRKKY
QRAMSRLSAL ARDAAAGNDT AGRVAGMLPG