Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1346 |
Symbol | |
ID | 3906559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1616068 |
End bp | 1617240 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637878679 |
Product | AFG1-like ATPase |
Protein accession | YP_480452 |
Protein GI | 86740052 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCAGC GTCTCGTCGA TCGCCGGCCG ATTGTGCCGC CCGGGGACCT GGTCGCGGCG CTCGTCCCGC CGCCCCGGTT CGACGCGGTC CGGTTCGCCG GCTACCTGCC CGATCCGGCC GAGCCGAGCC AGGCCGCCGC GGTCATGGCG CTGTCCGCGT TCGCCGACCG GTTGACCGCC TCGTCCGGGC GGTCCAGCCG TTCAGATCGT TCCAGCCGTT CCAGCCGTTC CAGGTATGCG GGCCATTCTG GGAAGGGCGG CCTGTGCGGG CTCCTGACCC GGGGGACGGG GGTGTCGGGT CCGTTCGGAT CGGGCCCGCG CCGTTCCGGA AGCGCCGGTC CGTCCGGAAT GCGGCCGGGG GTGTACCTCG ACGGCGGCTT CGGCGTCGGT AAGACCCACC TGCTCGCCTC GCTGTGGCAC GCCGTGCCCG GTCCGAAGGC GTATGGCACG TTCGTAGAAC TGACCTCCCT GGTCGGCGCG TTGGGATTCG CCGCGACCGC GCGGGCCCTC GCGGGCCTGC GCCTGGTCGC GATCGACGAG TTCGAGCTCG ACGATCCCGG CGACACGGTG CTGGTGTCCA GCCTGCTGAC TCGGCTCGTC GAGGCCGGTG TCCACCTGGC CGCGACGAGC AACACCCAGC CGGAGGACCT CGGTGCCGGT CGGTTCGCCG CCGCCGACTT CCGCCGTGAG ATCCAGGGTC TGGCGGCCAG CTTCGACATC CTCCGGGTGG ACGGGGAGGA CTATCGGCAC CGGGGTCTTC CGGCCGCGCC CCCGCCGTGT ACCGACGACG AGGTCGGCGC GCGGGCGGCT GCCGTGGAGG GGGCGACCGA GGACGGATTC GCCGCGCTGT GCGAGCACCT CGCCGGGCTG CACCCCTCCC GGTACGGCGC GCTCGTGGCC GGGGTCACCC TGGTCTGCCT GCACCGGGTC GTGCCGGTCG AGGATCAGGC GGTGGCGTTG CGGGTGGTGG TCCTCGCCGA CCGGCTCTAC GACCGGTCGA TCCCGGTCGT GGCCTCCGGC GTGCCCTTCG GGGAGCTGTT CGGAGCGGAG CTGCTCGCCG GGCCGCATCG CAAGAAGTAC CAGCGGGCCA TGTCCCGGCT GAGCGCGCTG GCTCGGGACG CCGCGGCGGG GAACGACACC GCGGGCCGCG TCGCCGGGAT GCTGCCCGGC TGA
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Protein sequence | MAQRLVDRRP IVPPGDLVAA LVPPPRFDAV RFAGYLPDPA EPSQAAAVMA LSAFADRLTA SSGRSSRSDR SSRSSRSRYA GHSGKGGLCG LLTRGTGVSG PFGSGPRRSG SAGPSGMRPG VYLDGGFGVG KTHLLASLWH AVPGPKAYGT FVELTSLVGA LGFAATARAL AGLRLVAIDE FELDDPGDTV LVSSLLTRLV EAGVHLAATS NTQPEDLGAG RFAAADFRRE IQGLAASFDI LRVDGEDYRH RGLPAAPPPC TDDEVGARAA AVEGATEDGF AALCEHLAGL HPSRYGALVA GVTLVCLHRV VPVEDQAVAL RVVVLADRLY DRSIPVVASG VPFGELFGAE LLAGPHRKKY QRAMSRLSAL ARDAAAGNDT AGRVAGMLPG
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