| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1214 |
|---|
| Symbol | |
|---|
| ID | 3903568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1448399 |
|---|
| End bp | 1450588 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637878547 |
|---|
| Product | peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_480321 |
|---|
| Protein GI | 86739921 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGACC GGATGCGGGT CCGCGTCCTG CTGCTGCGCG TGCTGGTCGT CTCCCTGCTC
ATCACACTCG GCGCGCGGCT GTGGGTGCTC CAGATCCTGG ACGGTGACCG TTACCGCCGG
GTTGCCGAGA CCAACCGGGT CCGCGAGGTG GTGACGCCCG CGACCCGGGG GATGATCCTT
GACGACAAGG GGCAGGCCCT CGTCCGAAAC CGTACGTCGC TGGTCATCTC GGTGAACCGG
TCGACCACGG ATCGGCAGGC CGACCAGGGC AGGGCCGTCC TCGCCCGCCT CGCCGCGGTG
ATCGGCACCC CCGCGGACGA GCTCGCCCGG CGAATCCGGT TCTGTAGCGC CCAGGTGAAG
CCGCCCTGCT GGAACGGATC GCCCTACCAG CCGGTACCGG TCGCCAAGGA CGTCAGTCCG
CGGCAGGCCC TCGCCGTCAT CGAACATCCC GACCGCTTCC CCGGTGTCTC CGCCGACCTG
CAGGCCGTCC GCGAGTACCC GCATGGCGCG CTGGCCGCGC ACGAGCTGGG CTATCTCGCG
CCGGTCAGTC AGGACCAGCT CGACAAGCAG GGGGATGAGA AGGGCTACCA CCTCAACAGC
CTGATCGGCG TCGCCGGTCT GGAGAGCACC TATGACGACG AGCTGCGCGG CACCGACGGG
GTGGAACGCC TGGAGGTGGA CCGGTTCGGC CGGGTGGCCG GTACCGCGTC GACCATCGCG
CCGCTCAGCG GTGACCACCT GGTGCTCAAC CTCGACCTCG ACGTGCAGCA GGCGGTCGAG
CAGGCGCTGA CGGAAACGAT CAAGAAGCTC GGGGGCGGCC CGCGCACCGC CTCCGCGGTT
GTGCTGGACG TGCGCACCGG CGGGGTGATC GCGATGGCGA GCCTGCCGTC CTACGACCCG
TCGGTCTTTA GCGGTGGGGT CTCGGAGAGC GATTACCGGG CGCTGTCCGA TCCCGCGAAC
GGCATCCCGC TGCTCTCGCG GGCCTACCAG GGGTCGGGGC CGGCCGGCTC CACCTTCAAG
GCCATCTCCA CCGCCGTCGC GATGCAGAAC CTGGGCGCCA AGGGGAACGA CCGCTACGAC
TGCGCGCCCA GCCTGCAGAT CGGTGACCAG GTCTTCCACA ATTTCGACGG CGAGTCGGCC
GGTCCGATCA CCCTGCACCA GGCGCTGGTC ATTTCCTGTG ACGTCATCTT CGACAAGTTC
GCCTACGACG CCTGGCTCGC GGACGGCGGG CTGCGTAACG GCCGTGGGCC CTACTCCCCC
CCGAAAGAAT ACTTCGTCAA GATGGCCCAG GCGATGGGCT TCGGCCGGAC CACCGGGCTG
GATCTGCCCG GCGAGACGCG GGGCTCCGTC GTCGACCGCG CCGGCGCCAA GGCGATCTGG
GCGGAGCTCA AGGACTCCTA CTGCCGGCGG GCCAAGAACG GCTACCCGGA GGAACCCGAC
CCGGCCAAGG CCGAGCGGTA CCGCAAGTAC GCCGCCGAGG CGTGCGTTGA CGGCTACCTG
TACAACGCCG GTGCCGCCAC CCAGTTCGCG ATCGGCCAAG GCCAGTACCT GTCGCTGAGC
CCGCTGCAGC TCGCCGTCGC CTACGCGGCC ATCGCCAACG GCGGCACCCT GTACAAGCCC
ACCCTCGCCA AGGCCACCGT GTCTCCGGAC GGCAAGGTCG TCAGGACCTT CGCGCCGCGC
CGGGCCGGGA CGCTGCCGGT CTCACCGGAG AACCTCGCCT ACATCCGGGA CAGCCTGCGC
GGGGTGACGA CGGAGGGCGG GGGCACCGCC ACCGGCGTCT TCGCGGACTG GCCGAGCGAC
GTCGTCCCGA TCGCGGCGAA GACCGGAACC GCCGAGGTTG AGGGTAAAGG GGACACCTCC
TGGTTTGCCT CCTTCGCGCC GGCGAACGAC CCCCAGTTCG CCGTCGTGGT CACCATCCCG
GACTCCGGGA CCGGCGCGGA GTTCGCGGCT CCGGTGGCCA AACAGATCTA CCAGGCAATC
TACGGTGTCG GCCGGCCGGC GGCGATGCCG GGTGGGAAAC CGCCGGCCGG GCTGCCGAAG
CTCAACCGGG ACGGGACGAT CGCGGCGGCG TCACCGCAGC CCGCCCCCGC GACGCTGGCC
TCGCCGGCCG GATCGGCGCC GGGCCCGGCC GCCCCCCTGC CCGGCACCAG CGGCGCGGGC
GTGACGGCGA CGGGCCGGGC GCCGCCCTGA
|
|---|
| Protein sequence | MNDRMRVRVL LLRVLVVSLL ITLGARLWVL QILDGDRYRR VAETNRVREV VTPATRGMIL
DDKGQALVRN RTSLVISVNR STTDRQADQG RAVLARLAAV IGTPADELAR RIRFCSAQVK
PPCWNGSPYQ PVPVAKDVSP RQALAVIEHP DRFPGVSADL QAVREYPHGA LAAHELGYLA
PVSQDQLDKQ GDEKGYHLNS LIGVAGLEST YDDELRGTDG VERLEVDRFG RVAGTASTIA
PLSGDHLVLN LDLDVQQAVE QALTETIKKL GGGPRTASAV VLDVRTGGVI AMASLPSYDP
SVFSGGVSES DYRALSDPAN GIPLLSRAYQ GSGPAGSTFK AISTAVAMQN LGAKGNDRYD
CAPSLQIGDQ VFHNFDGESA GPITLHQALV ISCDVIFDKF AYDAWLADGG LRNGRGPYSP
PKEYFVKMAQ AMGFGRTTGL DLPGETRGSV VDRAGAKAIW AELKDSYCRR AKNGYPEEPD
PAKAERYRKY AAEACVDGYL YNAGAATQFA IGQGQYLSLS PLQLAVAYAA IANGGTLYKP
TLAKATVSPD GKVVRTFAPR RAGTLPVSPE NLAYIRDSLR GVTTEGGGTA TGVFADWPSD
VVPIAAKTGT AEVEGKGDTS WFASFAPAND PQFAVVVTIP DSGTGAEFAA PVAKQIYQAI
YGVGRPAAMP GGKPPAGLPK LNRDGTIAAA SPQPAPATLA SPAGSAPGPA APLPGTSGAG
VTATGRAPP
|
|---|
| |