Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0997 |
Symbol | |
ID | 3906683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1186907 |
End bp | 1187563 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637878330 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_480109 |
Protein GI | 86739709 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCGCGC TCGATCTGCG AGGACATGGT GCCAGTGTTC GAGCACCCAT CGGGTCGTAC GGCCTACGCA AGGCCGCTGA TGATGTGGTG TCCTTCCTGA CCGCCCTGGG GGTCGAGGAG CCGATGCTGG TCGGCCACTC GTGGGGAGCC GCCGTGGCCC TGGTCACCGC GACCGGTGCC GAGTCGGAGC AGCTTCCCCC GACGGTGTCG AGTCTTGTTC TTGAAGACCC CCCGGTGATG ATGTCACCAA AGCTGCAGCG CGAACAGATC AACGATCTGA TCAAGGCCAT CGCACTGCCC GAAATAGAAC TGCGGGAAAT CCTCGCCATG GTTCATCCCA GCTGGCACCC CGATGATGTG GACAGTCTGC TGGAGGGTTT CCGGTACGCC GACCCTGCCA TCGTCGAGAG CCTGGTGCGC GATGGATCCT GTACGGGCTC GCTACTCCCG CTCCTAGGTC AGCTCACTGT TCGGACCCTT CTCATCCGCG CCAACCCGCT GCGGGGCGGA CTGTGGTCCG ACGAGGAATG GGCGCACGCA CGCCGCATCC TGCCCGCCTG CTGCACCACC GTCGAGTTGC ACAACGCATC ACACGACGTG CACCGTAGCC AGTTCAACCA GTTCATCCAG GCCGTTCGCG AATTCGCAGA GATCTGA
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Protein sequence | MFALDLRGHG ASVRAPIGSY GLRKAADDVV SFLTALGVEE PMLVGHSWGA AVALVTATGA ESEQLPPTVS SLVLEDPPVM MSPKLQREQI NDLIKAIALP EIELREILAM VHPSWHPDDV DSLLEGFRYA DPAIVESLVR DGSCTGSLLP LLGQLTVRTL LIRANPLRGG LWSDEEWAHA RRILPACCTT VELHNASHDV HRSQFNQFIQ AVREFAEI
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