Gene Francci3_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0997 
Symbol 
ID3906683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1186907 
End bp1187563 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content63% 
IMG OID637878330 
Productalpha/beta hydrolase fold 
Protein accessionYP_480109 
Protein GI86739709 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGCGC TCGATCTGCG AGGACATGGT GCCAGTGTTC GAGCACCCAT CGGGTCGTAC 
GGCCTACGCA AGGCCGCTGA TGATGTGGTG TCCTTCCTGA CCGCCCTGGG GGTCGAGGAG
CCGATGCTGG TCGGCCACTC GTGGGGAGCC GCCGTGGCCC TGGTCACCGC GACCGGTGCC
GAGTCGGAGC AGCTTCCCCC GACGGTGTCG AGTCTTGTTC TTGAAGACCC CCCGGTGATG
ATGTCACCAA AGCTGCAGCG CGAACAGATC AACGATCTGA TCAAGGCCAT CGCACTGCCC
GAAATAGAAC TGCGGGAAAT CCTCGCCATG GTTCATCCCA GCTGGCACCC CGATGATGTG
GACAGTCTGC TGGAGGGTTT CCGGTACGCC GACCCTGCCA TCGTCGAGAG CCTGGTGCGC
GATGGATCCT GTACGGGCTC GCTACTCCCG CTCCTAGGTC AGCTCACTGT TCGGACCCTT
CTCATCCGCG CCAACCCGCT GCGGGGCGGA CTGTGGTCCG ACGAGGAATG GGCGCACGCA
CGCCGCATCC TGCCCGCCTG CTGCACCACC GTCGAGTTGC ACAACGCATC ACACGACGTG
CACCGTAGCC AGTTCAACCA GTTCATCCAG GCCGTTCGCG AATTCGCAGA GATCTGA
 
Protein sequence
MFALDLRGHG ASVRAPIGSY GLRKAADDVV SFLTALGVEE PMLVGHSWGA AVALVTATGA 
ESEQLPPTVS SLVLEDPPVM MSPKLQREQI NDLIKAIALP EIELREILAM VHPSWHPDDV
DSLLEGFRYA DPAIVESLVR DGSCTGSLLP LLGQLTVRTL LIRANPLRGG LWSDEEWAHA
RRILPACCTT VELHNASHDV HRSQFNQFIQ AVREFAEI