| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0925 |
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| Symbol | |
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| ID | 3906089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1071161 |
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| End bp | 1072054 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878259 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_480038 |
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| Protein GI | 86739638 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.177236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCT CGCCGATGGG CCGCGGCGAC GTGCCGAGCG CCACCGGCCG CGCGGTCCCG
GCCGGTGGCC CGCCCGTCCG GTCCGCTCCG GTGGCGCGTA CCGCGCCGAT GCCGCGGGAC
CTGGCTCTCG GCGCGGCCGA GCTGCGCGGC ATCCTGCGCG TGGTGGAGGA CTGCGAGCGG
GCGTCGTCGC TGGCATCCTT CCGCGAGCTC GCCCTGGACG GCATGGCCCG GCATCTCGGT
TACCGGCATT CCGCCTTCTT CCTGGGCTCC TCGCTCGAGA CCGCCTTCCA GGACGCCCGG
CCCACCGGTC GCGGGCTGGC GCTTCGACTC GCGGGCCCCT ACCTGGAGCG TTACCGGGAG
CTGGAGGCCC TCAGCAATCC GGACAGCCTG CGTTCGGTCC GCGAGCGGGG GCTCGCCACC
CTTGACGATC TCGGCGTCCC GGAACGCCCG GAGGTGCGGA TGCGCCTGGA GCGGTTTCTG
CGGGCACACG GCATCCACGC GAAGCTGCTC ATCCGCCTGT TCGGTCCGTC GAACGTGGGC
GCCGTGGTGT CCCTGCTGGA TTCTCGGCCG GGCGCGTTCG GACCGCGGGA CCGCGCCGTC
GGGGCAGTTC TCGGGCGGCA TCTCGGTAAT CTCCTGCGTT TCTACATCCG GGCGGACCCG
GGCCCGTCGG TCGCGGGCAA GCTGTCGGCG CGCGAGCGCG ACGTCGTCCG TCTCGTCGCC
GAAGGCCGTT CCAACCGCCA GGTCGCCGAG GCGCTGTGCA TCAGCATCGA CACGGTCAAG
CACCATCTCA CCCATGCGCT CGTGGCGACG GGGTGCACGA ACCGGACCCA GCTGGCGATC
GCGTGGCAGC GGGAGACGAG CGCGTTCGCG GCCCCCGGCA ACCCGCGGCC CTGA
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| Protein sequence | MGGSPMGRGD VPSATGRAVP AGGPPVRSAP VARTAPMPRD LALGAAELRG ILRVVEDCER
ASSLASFREL ALDGMARHLG YRHSAFFLGS SLETAFQDAR PTGRGLALRL AGPYLERYRE
LEALSNPDSL RSVRERGLAT LDDLGVPERP EVRMRLERFL RAHGIHAKLL IRLFGPSNVG
AVVSLLDSRP GAFGPRDRAV GAVLGRHLGN LLRFYIRADP GPSVAGKLSA RERDVVRLVA
EGRSNRQVAE ALCISIDTVK HHLTHALVAT GCTNRTQLAI AWQRETSAFA APGNPRP
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