Gene Francci3_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0897 
Symbol 
ID3905154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1039057 
End bp1040199 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content69% 
IMG OID637878230 
Productradical SAM family protein 
Protein accessionYP_480010 
Protein GI86739610 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCG TCCACCTTGA TCCGCCACGC CTGCGGAGGG ATGACGACTA CGGCCACGCC 
CGGATGCCGC GCCGGGCCAG CCTGCCCGCC CCCGATCGGA TCGAGCGCAT CGCCTACGGC
CGCTTCCGCA ACGTGTACCT GTACATCACC GAGGCGTGCC AGCTCCGGTG CGAGCACTGC
TACATGGGCG AACGGCTGGA CCGGGCGCTC AAGCTGACCT TGCCGCAGAT CCGGGACACC
CTCGCCACGT GGCGCCGGAT GGGCGGCAGC AAGCTGACCA TCCTCGGCGG CGAGCCGACA
CTGCACCCCA ATTACGTGGA CGCCATCCGG CTCGGCCGGC AGCTCGGCTA CGAGGACGTC
ATCACGACGA CCAACGCCCA GAAGCCGGCG GCCCGCAAGT TCCGCCAGCT CGAACCGGAG
GACTTCGCCT ACGTCCAGGT CAGCCTCGAC GGCGGCAGCG CCGAGACCCA CGACCGGGTA
CGCGGTGCGG ACACCTTCGC CACTGCGCTG GAGACGACGG CCGAGCTGAC CGGCCGTGGC
TTCGACACCC GGATCATCTG CACCGTCAAC CAGGCCAACA AGCCCGACGC CCTGAAGTTG
CTGGACATCG CCGACGAGAT CGGCGTGTCC CTGGTGAAGT TCCACGTCTT CTCGACCATC
GGCGTGGGGC ACGGCAACGC CGACATGGCC ATCGGACCCG CGGAGTGGGT GACGTTTTGC
GACGACCTGA ACGGAATTGC GCCGGCCTAC CGGACGCGGG TCTGGTACCA GCCGACGTAT
GCCCGCCGCG ACCAGATGGC CCGCTACGCC GCCGAGGGCT ACCAGGGCTG CATCGGGCGG
ACGCTGGACC GGATCTCGAT CTTTCCCGAC GGCAGGTGCT ACGTCTGCTC CTACCTGTTC
GACACCGACC TGTACTTCGC CCGGATGCAG GACGGGCAGG TGGTGCTCAA CCGCGGTGAC
AACGAGTTCG ATCTCTTCAC CCGGCCGCTG GTCACGAGCG CCTGTGGCGG CTGCAAGGCA
TCAGCCTGCC AGGGCGGCTG CCCGGCCGAG GAGATCGTCA TGGGCGGCTC GTCCTGCGCT
GCCGAGCCGG ACATCGTGCC GGTGTGCCGG CTGTGGAAGT CCAGCGCCAA GCCCGAGGAC
TGA
 
Protein sequence
MTTVHLDPPR LRRDDDYGHA RMPRRASLPA PDRIERIAYG RFRNVYLYIT EACQLRCEHC 
YMGERLDRAL KLTLPQIRDT LATWRRMGGS KLTILGGEPT LHPNYVDAIR LGRQLGYEDV
ITTTNAQKPA ARKFRQLEPE DFAYVQVSLD GGSAETHDRV RGADTFATAL ETTAELTGRG
FDTRIICTVN QANKPDALKL LDIADEIGVS LVKFHVFSTI GVGHGNADMA IGPAEWVTFC
DDLNGIAPAY RTRVWYQPTY ARRDQMARYA AEGYQGCIGR TLDRISIFPD GRCYVCSYLF
DTDLYFARMQ DGQVVLNRGD NEFDLFTRPL VTSACGGCKA SACQGGCPAE EIVMGGSSCA
AEPDIVPVCR LWKSSAKPED