| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0858 |
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| Symbol | |
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| ID | 3904340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1000133 |
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| End bp | 1001626 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637878191 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_479971 |
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| Protein GI | 86739571 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.359757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGTC ACACTTGGCT ATGGACGCCG CCGCGTTCTA CTCCCACCAG CGTTGGTGTG
GGCCAACTCC TACGCGCGTA CCGGCAGGCC CACGGCCTCA CGCAGCAGCA GCTCGCCGAC
CGTCTGGGCT TCGACCAGTC CTACGTATCC AAGGTGGAGA GCGGCCGGCG GGCTATCCAC
GACATCTCGA CGCTCCGTCA CATCGCCCGC AATCTGGCGC TGTCCCCCGA GGACGTCGGC
CTGGCCCCGG GATCGATGAC GGACCGTCGC CGGGAGACAG CGCCGCGCAG TCCGGCGGCC
GAGCAGGCCG CCGCGAGCCA ACGCGCGTGG CGGCTCACCC GCGATCACCT CAACCACCAT
CGGATCAGCC TCGCCCGCGC GGCGGTGCGG CTCTACCCGG AAACCGACCG ACTCGGCAGC
GGGCTACTGG CCCGACCCGG CTGGGTGTGG GACACCCCGG TGGACATCGA CGATGTCACC
CTTGGGTGGC ACGATAGCGC CGAGGCCCCC ACGATCAGGG GAGACGAACC CGAGACGGCC
GGTAGCCGGC CCCTGCTCGG TGGAGGCGGT CAGCAGAACC GCTACCAGCG CTACACGCGG
GCGATGCGGG ACCTCGACCG GCCGACCCTG TTCGAGAACC GGCTCAGTTT TCGCCTGCTC
GATATCGGCG GTGACGGGAC CGCGGGACCG TCAACGGACA ACCATCCGTC GCTGAGCTTC
GCCCACACGA CGTACTTCGA CGCCGTCGAC GTCTGCGAGA CCGTCGCACA CGAGACGGCG
GCCGCGATGG CCGGCAGCGG ACTGTCCTGG CCCGCGCTGC CCTTCCGGGC GCGCATCGGA
GATCCGTTCG ACTTCACCCG GCGGGCGGCC CTGCCGTCCA TCAACACGCT CACGATCCGC
CACGATCGCG GCGGCCAGGC GAGCTTCTTC CTGCACCGGC GCAGCGCGGG CTCGGTCGCG
ACCGCGGGCG GGGTGTACCA CGTCATCCCG GCCGGGGTCT TCCAGCCGTC GGGCATCACC
CCGTTCCACC ATGAGGCCGA CTTCGACCTG TGGCGCAACA TCATGCGTGA GCTGAGCGAG
GAGCTGCTGG GCAACCCGGA GCACGACGGC AGCTCGTCCA GCCCGATCGA CTATGACACC
GACGAGCCGT TCCGTTCGTT CGAGCAGGCG CGTCGGTCCG GCGCCATGCG GGTGTCGTAC
TTCGGGATCG GGCTGGACGC GCTCACTCTG TTCGGCGAGA TCCTCACCGT CGTCGTGGTG
GACGCCGACG CCTTCGACCG GCTTTTCGGC AGCATGGTCC AGACCAATGC CGAGGGATCG
GTCGTCACCG CGGGTCCGAA CCGGTCGGTG ACCGAGGGCA TCCCGTTCAC CCACTCGGCG
CTGCGCCGTC TCGTCGACAC CGAGCCCATC GCCCCGTCGG CCGCCGCCTG CCTGGAACTC
GCCTGGCGCC ACCGGGAGAC CCTCCTCGGG ATGCGCATGC GGGCCGCATC CTGA
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| Protein sequence | MTGHTWLWTP PRSTPTSVGV GQLLRAYRQA HGLTQQQLAD RLGFDQSYVS KVESGRRAIH
DISTLRHIAR NLALSPEDVG LAPGSMTDRR RETAPRSPAA EQAAASQRAW RLTRDHLNHH
RISLARAAVR LYPETDRLGS GLLARPGWVW DTPVDIDDVT LGWHDSAEAP TIRGDEPETA
GSRPLLGGGG QQNRYQRYTR AMRDLDRPTL FENRLSFRLL DIGGDGTAGP STDNHPSLSF
AHTTYFDAVD VCETVAHETA AAMAGSGLSW PALPFRARIG DPFDFTRRAA LPSINTLTIR
HDRGGQASFF LHRRSAGSVA TAGGVYHVIP AGVFQPSGIT PFHHEADFDL WRNIMRELSE
ELLGNPEHDG SSSSPIDYDT DEPFRSFEQA RRSGAMRVSY FGIGLDALTL FGEILTVVVV
DADAFDRLFG SMVQTNAEGS VVTAGPNRSV TEGIPFTHSA LRRLVDTEPI APSAAACLEL
AWRHRETLLG MRMRAAS
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