Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0818 |
Symbol | |
ID | 3906445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 953690 |
End bp | 954526 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637878151 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_479931 |
Protein GI | 86739531 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCC GGTCTCGCCC CGCTTTCGGT AACGGAGTGT CTACATCTCT CACCGGGCTG GCCCTACGGG CCGGCTCGGT CGTCTCGACC TGGCCGCCCC GGACCGCCGT CATCACGGGA GCATCCAGCG GTATCGGCCG GGAGGCCGCG CTGCTGCTGG CCGCGGACCG ATGCCGGTCG CTGCTGGTCG GTCGCAACGG GGCCGCGCTT GACGAGGTGG CCGCGGCGAC CGAGGGGCAC CGGATCGCGG TCGACCTGTC TAGTCCCGGC TCGGAACTGA TGGTCTCCTC CCGGGCGACC GAGCTTCTCG GCGAGGTCGA CCTGCTGGTG TGCTCGGCAG GCCTCGGGGC GGCGGGCCCG TTCGAGGTAA TGTCCCCGGC CGCGATCGCG GAGCTGGTCA CGGTCAACGT GCTGTCGCCG ATGATGCTGG TCCGGGCCAT GTTGCCGGCC ATGCTCGACC GCGGCCAGGG GCGCATCCTG CTGGTGGGCA GCATCGCCGG CGCGCTGGGA GTGCGCGGTG AGGTCGCCTA TTCCGCAACC AAGGCCGCTC TGCTCGGTTT CGCCGACGCG TTGCGGTCCG AGGTTGCCGG TCGCGGTGTG ACGGTGACCC TGTGTCTACC TGGTGTCGTC GACACACCAT TTTTCCACCG CCGTGGCGCG CCCTACGTCC GTCGCTGGCC CCGGCCCATA CCGGCCGGGC TTGTCGCGCA GCGCATGCTG GCGGCCACCG GACGCGGCGA CGCTGAGATC TGGGTGCCAC GCTGGTTACT CGGCGCGGTG CGGGTCCACG GTGCGATCCC GTCGGTCTAC CGCAGGCTGG CGGGTGTCTT CGGATGA
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Protein sequence | MSTRSRPAFG NGVSTSLTGL ALRAGSVVST WPPRTAVITG ASSGIGREAA LLLAADRCRS LLVGRNGAAL DEVAAATEGH RIAVDLSSPG SELMVSSRAT ELLGEVDLLV CSAGLGAAGP FEVMSPAAIA ELVTVNVLSP MMLVRAMLPA MLDRGQGRIL LVGSIAGALG VRGEVAYSAT KAALLGFADA LRSEVAGRGV TVTLCLPGVV DTPFFHRRGA PYVRRWPRPI PAGLVAQRML AATGRGDAEI WVPRWLLGAV RVHGAIPSVY RRLAGVFG
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