Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0792 |
Symbol | |
ID | 3905728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 922491 |
End bp | 923327 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637878125 |
Product | polysaccharide deacetylase |
Protein accession | YP_479905 |
Protein GI | 86739505 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.623292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTCCC TGGCGCCTGC GGCGTCCGGC GCCGCAGGCG GCGTGTTCGA GGGTGCGCCC ACGATGCCCC TGCCCGTCCT TATGTACCAC GGCGTCGGTG ATTCGGTGAG TGCGGACTTC CGACGCTGGG AGGTCCCTCC CGGTGCCTTC GCCGAGCAGC TCGAGGCCCT CGTCGAAAGC GGCTACCACC TCACCGGTCT CACTGACGCG CTGGCACATC CCACCCGCCG CCAGGTGGTG ATTACCTTTG AGAACGGCTT CGAGGACTTC GTCACCACCG CGGTGCCCGC TCTGCGGGCG ATCGGGGCCA GCGCTACCCT GTATGTGCCG ACCGCCTTCG TCGGCCGGCG CGCCACCTGG CTGGATGGCT ACACCGAGCG CAACCTCCCC CTGTTGGACT GGTCCGACCT CGCCGCGCTC GCCGGGGAGG GCATCGAGCT TGGCTCGCAC GGTCACCGTC ATCTGGAGCT CGACGTGGTG CCGACCGCTC TGGCGCGGTA CGACGTCACC GCCAGCCGGC GGCTGATCGA GGAGAGAACC GGCCGGCGTC CGGACAGCTT CTGCTACCCC TTCGGTTATC ACTGTGCGGC GGTGCGCCAT GTCGTCGCGG CCGCCGGGTT CGAATCAGCC TGTGAGGTCG GATACCGCAT TCATCAACCG ACGTTGTCCC GGTTCGCCAT CAGCCGATTG ATCGTCAATC GGGCCGCTGG GGCGGCCGAC ATCCTTCGGC TCGTTTCCCA GGGGCATCGC GACGCCCTGC TCAGCGTCCG GCGAGGACTG CAGTCGGGGT GGCGGACATA TCGAGCGGCG CGCTGGCGGC TCGGCCGAGG CGCCTGA
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Protein sequence | MTSLAPAASG AAGGVFEGAP TMPLPVLMYH GVGDSVSADF RRWEVPPGAF AEQLEALVES GYHLTGLTDA LAHPTRRQVV ITFENGFEDF VTTAVPALRA IGASATLYVP TAFVGRRATW LDGYTERNLP LLDWSDLAAL AGEGIELGSH GHRHLELDVV PTALARYDVT ASRRLIEERT GRRPDSFCYP FGYHCAAVRH VVAAAGFESA CEVGYRIHQP TLSRFAISRL IVNRAAGAAD ILRLVSQGHR DALLSVRRGL QSGWRTYRAA RWRLGRGA
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