Gene Francci3_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0558 
Symbol 
ID3904209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp650041 
End bp650529 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content61% 
IMG OID637877887 
Productputative nucleotide-binding protein 
Protein accessionYP_479671 
Protein GI86739271 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGATC CATCCTTCGA CATCGTCAGC AAAGTTGACG CCCAGGAGAT AGACAACGCC 
GTCAACCAGA CGGTCAAGGA AATCCGGACC CGCTTCGACT TCCGTGACAC CGGCGCATCC
GCGACGCTGT CCGGCGAGTC GATTCTGCTT GTAGCGAACA CGGACGAGCG GGTCAAGGCG
GTGCTCGACG TACTGCAGGA GAAGTTCGTC AAACGCGGCA TTTCCCTCAA GGCCCTGACC
TTCGACGAGC CCAAGCCGTC GGGCAAGGAG TTCCGGTTGC CCGTCACCGT TCAGCAGGGC
ATCGCGGAGG ACAAGGCCAA GGCCATCGCC AAGAAGATCC GGACGGATGG CCCGAAGGGG
GTACAGGCCC AGATTCAGGG TGATCAGCTA CGGGTGACCG GGAAGAAGCG CGATGACCTG
CAGCGCGTGA TCCAGATACT CAAAACCGAG GACTTCGAAG TTCCCCTCCA GTTCGTCAAC
TACCGCTGA
 
Protein sequence
MADPSFDIVS KVDAQEIDNA VNQTVKEIRT RFDFRDTGAS ATLSGESILL VANTDERVKA 
VLDVLQEKFV KRGISLKALT FDEPKPSGKE FRLPVTVQQG IAEDKAKAIA KKIRTDGPKG
VQAQIQGDQL RVTGKKRDDL QRVIQILKTE DFEVPLQFVN YR