Gene Francci3_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0347 
Symbol 
ID3905192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp402259 
End bp403551 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content68% 
IMG OID637877676 
Productacyltransferase 3 
Protein accessionYP_479463 
Protein GI86739063 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.994465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTCGC CTGGGACGGC ACGCACGGCT GACGATCAAG GGGGCGCGTT GACCCGGAGG 
ACCTCGCCAG AATCCGCCCA GCAGGAGAGC TTCCGTCCCT CGCGGCAGCT CCCAGCACCT
CAGACCGGGC TGGAGCTGCC CACGTTGACC GGCTTGCGGG GAGTCGCCGC CACTCTGGTG
TTCCTCCGCC ACATCCACGC GGACGTCCAG GGGACCCTGC CGGTGGTCGC GGTGCTGGGC
AACATCGGTT ACGTGGGCGT CACGTTCTTC TTCGTGCTGT CGGGGTTCGT CCTCACCTGG
GCGACCAGGC CGATCACCGC GGGGCAGTTC TACTGGCGCC GGTTCGCCCG GGTCTATCCC
CTGTACTTCG CCGCCATCTG GATCTGGCTC GCGATCGCGT GGCCGCTGGG GACATTGGGG
GACTTCGGCT CGAAGCCCCT CTCCATCCTG CCGAGTCTGC TCCTCGTCCA GGCATGGGTT
CCAACCCAGT CGATCTATTT CGGCTGGGGT GGTGCCGTGC TGTGGTCGTT GTCCTGCGAG
GCGTTCTTCT ACCTGGTCTT CCCCCACGTG TACCGCAGGT TCGCGACCCG CACCAACCCC
GAACGCATCC GCGCCGCGCT CCTGTTCGTT CTCCCTGCCG CGGCCGTGGC ATGTGCGGCG
AGCACCGCGG GCTCTCGGTT CGATCTTGCC GCGTACGCGA ACCCGGCGGT GCGGCTCGGC
GAGTTCGTCC TTGGCGTGGT CCTTGGGTTG CTGGCTCGTG AGGGTGCCCG CGCAACGCCG
TGGCAGCGTC GGATGCTCAC CGCCTTCTCC TGCGCCTGGC TGGTCGTCCC GATACTCCTG
GGCTACCGCT ACGGCCATCT ACAGGGATTC ATGGACACGC TCACACTGCC GGCGTTTGCC
ATCATCATCT TCCTGGCCGG CACCCGTGAG GCGGACGGCC GCCGGATTCC GGTGTTCAGC
TCCCGCCCAC TCGTCTATTT CGGCGAGATC TCCTACGCCT TCTATCTCAT TCACCCCGCC
ACACTCACGA TCAGCGGGGA ACTCGGCTGG GTCGACGCCA CCACCGCGGC CGGGACGGCG
CTCGCCATCC TCGCCGACTT CGCCCTGTCC TTCGCCTTCG CCGCGGCCCT GCATCACACG
GTGGAAGGCC CGGCCCGCCG ATGGCTGATG GGGGTACTCC GGTCACGATC GTCCCCCCGT
CATGCCTACC GGAGTCTGCT GCCCGATGTG CGACCGCGGA TCCCACCGGA GTCCGCAAGC
GCGGATCATG TCGTACCTGT CGCTCGTCCG TGA
 
Protein sequence
MASPGTARTA DDQGGALTRR TSPESAQQES FRPSRQLPAP QTGLELPTLT GLRGVAATLV 
FLRHIHADVQ GTLPVVAVLG NIGYVGVTFF FVLSGFVLTW ATRPITAGQF YWRRFARVYP
LYFAAIWIWL AIAWPLGTLG DFGSKPLSIL PSLLLVQAWV PTQSIYFGWG GAVLWSLSCE
AFFYLVFPHV YRRFATRTNP ERIRAALLFV LPAAAVACAA STAGSRFDLA AYANPAVRLG
EFVLGVVLGL LAREGARATP WQRRMLTAFS CAWLVVPILL GYRYGHLQGF MDTLTLPAFA
IIIFLAGTRE ADGRRIPVFS SRPLVYFGEI SYAFYLIHPA TLTISGELGW VDATTAAGTA
LAILADFALS FAFAAALHHT VEGPARRWLM GVLRSRSSPR HAYRSLLPDV RPRIPPESAS
ADHVVPVARP