Gene Francci3_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0126 
Symbol 
ID3903456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp155958 
End bp156923 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID637877459 
Producthypothetical protein 
Protein accessionYP_479249 
Protein GI86738849 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CTCATGACGA TCTCGCGGTG TTTGCCGGAC GCGTCGTGAA CCTGCCGAAG 
GCGACTGCGG ACGAGGATCG GAAGCAGGTG AACCACCTCC GCGAGCGCCT GCACGCGCAT
ATCGCCAAGC ACCCAAACTT CTCGCTGGTG AAGATGCTTC ACGCGGGCTC GGTCGCCAAG
GGGACCGCGC TTCGGAACGT CCTCGACTAC GACGTCGCCG TGTACGTCCG CCTGGCGGAA
GCCCCGCAGG ACGGCGCGGA GCTGGTGGAC TGGCTCGCGG AGCGGCTCCG GGAGGCATAC
GGCGGCTTGA TCGACCCGTC ACAGATCGAG GCGACGACCC ACTGCGTCAA CATCCACTTC
AAGTCCAGCG GCATCGACGT CGACGTCGTC CCGGTGCTGT ACGAAGGCGA TCCGGACGAC
CGGGGCTACC TCGTCTCCAA GAGCGATGGG CGCCGGCTGC TCACCAGTGT GCGACTCCAC
CTCGACTTCG TCCGCGCCCG CAAGCGCGCC TGCCCTACGG ACTGGGCGCA GGTCGTGCGG
CTGGTGAAGT GGTGGGTCCA CGCGCAGAAA GACCGAGACG CGGACTTCCG CTTCAAGTCG
TTCATGGTCG AGCTGCTGTG CGCCCACCTG CTCGACACAG ACAAGATCGT GTTCAGTGAC
TACGTCACGG CCCTGGACGG CTTCTTCGAC TTGGTGGTCC GGACCGAACT GAACGAGCGA
ATCGCCTTCA CCGACTACTA CCCGGCCTAC GCCCTCCCAC GGCAGCGGAC CGACGTGATC
GAGATCTTCG ACCCGGTGAA CCCGGAGAAC AACGCGGCAC GCCTCTACAC GATGAAGGAC
CAGCAGAGGA TCGTCACGGC CGCCGAGCGG GCACTGGACG CGATCACTGA AGCCCGGCAC
GCCACGACGA GGGCCCAGGC CATCGAGTGC TGGCAGGTCG TCCTCGGCGA CCGGTTCCGG
GGTTGA
 
Protein sequence
MKITHDDLAV FAGRVVNLPK ATADEDRKQV NHLRERLHAH IAKHPNFSLV KMLHAGSVAK 
GTALRNVLDY DVAVYVRLAE APQDGAELVD WLAERLREAY GGLIDPSQIE ATTHCVNIHF
KSSGIDVDVV PVLYEGDPDD RGYLVSKSDG RRLLTSVRLH LDFVRARKRA CPTDWAQVVR
LVKWWVHAQK DRDADFRFKS FMVELLCAHL LDTDKIVFSD YVTALDGFFD LVVRTELNER
IAFTDYYPAY ALPRQRTDVI EIFDPVNPEN NAARLYTMKD QQRIVTAAER ALDAITEARH
ATTRAQAIEC WQVVLGDRFR G