Gene Fnod_1232 details

Gene Information

• Locus tag: Fnod_1232
• Symbol: cmk
• ID: 5453340
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 1327258
• End bp: 1327917
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640875008
• Product: cytidylate kinase
• Protein accession: YP_001410736
• Protein GI: 154249911
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0283] Cytidylate kinase
• TIGRFAM ID: [TIGR00017] cytidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCATTGTA AAATAGCAAT AGACGGCCCC GCTGGATCTG GAAAGACCAC TGTTGCCAAG 
CTAATTGCTC AAAAGCTTGG AATTGACTAT TTAGACACTG GAGCTATGTA CCGTATTGTC 
GGGTTGTATT TGCATAGCAT TGGCGTAGAG CCGAAATCTA CAAGTATTAA AGACATTCTG 
GAAAAAGTTA ACATAGAATA CATTGGTAAA GATTATTATT TGAATGGAAA AAAAGTGGGC 
GATGAAATAA GAACACCGGA AGCAGGAATG TTTGCTTCAC AGTACGCAGC TAATCCAGAA 
GTTAGAGAAT TCCTTACAAA AATACAAAAG CAAATATGCA GTAACAGAAG TATCGTTGCA 
GAAGGCAGAG ATATAGGGAC CGTAGTCATG CCTGATGCAA CAGTAAAGAT TTTTCTCGTA 
GCTTCGCCTG AAGTTCGCGC GAGACGAAGG TACGAGGAAC TAAAATCCAA GAACATGGAA 
GTTAGCTACG AAGAACTATT AAGACAAATT GAAGAAAGAG ATAAAAACGA TTCTAACCGT 
GATGTGGCAC CGCTTGTAAA AGCTCCAGAT GCTATAGAAA TAGATACATC AAATTTGAGC 
ATAGAAGAAG TTGTTGAAAA AATTTTAGAT ATTGTAAAAG AAAGGTGCAG AATAAAATGA 

 

Protein sequence

MHCKIAIDGP AGSGKTTVAK LIAQKLGIDY LDTGAMYRIV GLYLHSIGVE PKSTSIKDIL 
EKVNIEYIGK DYYLNGKKVG DEIRTPEAGM FASQYAANPE VREFLTKIQK QICSNRSIVA 
EGRDIGTVVM PDATVKIFLV ASPEVRARRR YEELKSKNME VSYEELLRQI EERDKNDSNR 
DVAPLVKAPD AIEIDTSNLS IEEVVEKILD IVKERCRIK