| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0623 |
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| Symbol | |
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| ID | 5452439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 688343 |
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| End bp | 688993 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640874364 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001410135 |
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| Protein GI | 154249310 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000261744 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGGATT TTGACAATAA TGAGAAATAC ACTATTGGCG AAGAGATAGC AAATTCTATA
ACTCATGGTG TGGGGGCTTT ATTTGGAATA GCAGGATTGG TTGTACTTAT TATTTTTTCG
ACTTTTACAC ATGATGCACT TAAAATTGTT TCAGCGGTTA TTTACGGTGT ATCTCTAATG
ATAATGTATC TTTCGTCAAC TTTATACCAT TCTATACAGC ACAAGAAAGC CAAGCAAATA
TTTGAGATAC TCGATCACTC GTCAATATAT CTTTTGATAG CTGGAACGTA TACGCCTTTT
ACTTTAGTTT CACTTAACGG AAAAATTGGA TGGACCATGT TTGCTATAGT GTGGTTACTT
ACTGCTATAG GTATTTTCTT AAAAGTATTC TTTGTGAAAA GGTTTTTGAT ACTCTCAACG
CTTATTTATA TATTTCTTGG TTGGATGATA GTATTCGAAT TCAAACCTTT AATTTCGGCA
ATTTCAAATA CAACACTATG GTTGTTAGTG CTTGGTGGGG TATCATATAC GCTTGGTACA
ATATTTTACG TTTGGAGAAG ATTGAAATTT GGGCATATGG TATGGCATTT GTTTGTTTTG
CTTGGAAGTT TTTTACATTA CTTTGCTGTG TTCAATGTTG TAGCTCGTTG A
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| Protein sequence | MRDFDNNEKY TIGEEIANSI THGVGALFGI AGLVVLIIFS TFTHDALKIV SAVIYGVSLM
IMYLSSTLYH SIQHKKAKQI FEILDHSSIY LLIAGTYTPF TLVSLNGKIG WTMFAIVWLL
TAIGIFLKVF FVKRFLILST LIYIFLGWMI VFEFKPLISA ISNTTLWLLV LGGVSYTLGT
IFYVWRRLKF GHMVWHLFVL LGSFLHYFAV FNVVAR
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