| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0474 |
|---|
| Symbol | |
|---|
| ID | 5452324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 510465 |
|---|
| End bp | 511196 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640874224 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001409996 |
|---|
| Protein GI | 154249171 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
|---|
| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGAAC TCGAGAATAT ATCGTACAAG ACTCAAGAAA AAACGATACT AAAAGACATA
TCGCTAAAAT TCATCCCAGG TCACAGATAC GCTTTGATAG GTACAAACGG TGCAGGTAAG
AGTACGATTG GTTATTTAAT AATGGGACTT GATGGCTATA AGCCTACGAC TGGAAGAATT
CTTCTTGATG GGAAAGATAT AACAAACTCA TCAGTAACTG AACGCGCGAA GCTTGGAATC
ACACTTATGT GGCAAGAACC AGCCAGATTC GATGGAATGA CTATAGAAAC CTATCTTACA
TTAGGTGGAA AATTGCCTGC ACAAAAATCA GAAATCATTG AAGCTTTGGA ATTTGTTGGA
TTAAACCCGA ACATATACTT AAAAAGATTC GTCGATAAGA CGTTAAGTGG TGGGGAAAGA
AAACGCGTTG AGCTAGCATC TATTTTACTT ATTAAGCCAA AGTACGTTAT ATTAGATGAA
CCGGATTCTG GTATCGATTT AATGAGCTTA AACATAATAA ATGATATAGT TAATTACATA
GCACAATACG GTGGGACACC TATAATAATA ACCCACCGCG AGGAAATGGC TTACAATACT
GACTATGGGT ATCTTATATG TTCTGGAAAA ATCCTCATGC ACGGACCAAT AAATAATGTT
ATAACCGCAT TTAGAAACAG TTGTGAAGCA TGTAATCATC CAAATATTCC TATTCCAGGG
GAGTTGAAAT AA
|
|---|
| Protein sequence | MLELENISYK TQEKTILKDI SLKFIPGHRY ALIGTNGAGK STIGYLIMGL DGYKPTTGRI
LLDGKDITNS SVTERAKLGI TLMWQEPARF DGMTIETYLT LGGKLPAQKS EIIEALEFVG
LNPNIYLKRF VDKTLSGGER KRVELASILL IKPKYVILDE PDSGIDLMSL NIINDIVNYI
AQYGGTPIII THREEMAYNT DYGYLICSGK ILMHGPINNV ITAFRNSCEA CNHPNIPIPG
ELK
|
|---|
| |