| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0278 |
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| Symbol | |
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| ID | 5453095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 296218 |
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| End bp | 297276 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640874024 |
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| Product | twitching motility protein |
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| Protein accession | YP_001409801 |
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| Protein GI | 154248976 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.378494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAACA TTTACGAAAT TGTTAGTAAG GCAAGAAATA TGAGGGCCTC AGATGTTCAC
TTATCCGTTG GTAATCCACC AATTGTACGG GTTGATGGTT TTCTTTCAAG AATGCAGGGA
TATCCTATAA TTGAAAAATC AGATTTAAAA GAGGCAATTA AGCACCTTAT GATGGAAGAA
GGTATTGCTT CCGAAAATAT GGAAGTAGAT TTTTCCTTTG GATTTGAAGA CGTTAGAATA
AGAGCAAATT TATACTATGA AAGAGGTAAT CCGACGCTTG CTTTGAGAAT TATAACAAAG
AAAATAAGAA CATTTGAAGA ACTTGGTTTA CCACCCGTTT TGAGAGAATT TTGTGAAAGA
GATACAGGTT TAATAATTGT TACTGGTCCA ACGGGAAGCG GTAAATCCAC AACACTTGCT
GCCATGGTAG ATTATATAAA CTCTAAATAC GCTTATCATA TAATCACTAT AGAAGACCCT
ATTGAATATA TTTTCGAAAA CAAGAATTCT CTTATTCATC AAAGAGAAGT TGGTAAGGAT
ACGGAAAGTT TTGCAGACGC TCTTAAATAC GCTTTAAGAC AAGATCCTGA TATCATATTA
GTTGGGGAAA TGCGTGATCT CGAAACAATT TCGCTTGCAC TTACCGCTGC AGAAACCGGG
CACTTGGTCT TTGCAACGCT ACATACTAAC TCGGCAGCAA CCGCCCCAGA AAGAATAGTC
GATGTTTTCC CGGCACACCA ACAAAAGCAA GTATCATTGC AACTTGCAAA TACTCTTGTG
GGGGTAGTTT ACCAAAGACT TGTACCAAAG AAATCGTCTG GAGTAATACC GATAGTTGAA
GTTCTCGTTG CCAACATAGC TGTCAGAAAT TTAATAAGAG AGGGAAAAAT ACATCAAATA
GAGAGTATAA TGCAAACTGC TCAAAAGCAG GGAAATATAT TATTTGACGA TGCTTTACTT
AAGGCTTACT TTTCAAATGA AATAACAAAG GAATCTGTGA TTGGATTTGC ACGCAATCCT
GAGGAGGTGG CAAAGAAGAT AGGATGGACA GGAGTTTAA
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| Protein sequence | MLNIYEIVSK ARNMRASDVH LSVGNPPIVR VDGFLSRMQG YPIIEKSDLK EAIKHLMMEE
GIASENMEVD FSFGFEDVRI RANLYYERGN PTLALRIITK KIRTFEELGL PPVLREFCER
DTGLIIVTGP TGSGKSTTLA AMVDYINSKY AYHIITIEDP IEYIFENKNS LIHQREVGKD
TESFADALKY ALRQDPDIIL VGEMRDLETI SLALTAAETG HLVFATLHTN SAATAPERIV
DVFPAHQQKQ VSLQLANTLV GVVYQRLVPK KSSGVIPIVE VLVANIAVRN LIREGKIHQI
ESIMQTAQKQ GNILFDDALL KAYFSNEITK ESVIGFARNP EEVAKKIGWT GV
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