| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4088 |
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| Symbol | |
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| ID | 5090814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 4894247 |
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| End bp | 4895815 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644743507 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001196415 |
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| Protein GI | 146301824 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.59776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA TACTAATAAT ACTCTGCTTC ATAACTGGAT TGAACACCAC TTTCGCAAAC
GACGGCTGGT TAAACATCTT AAAAGAAGGA GGAAATAACA AAGGAATAAA ATGCACTCAA
GCCATTCAAA ATGCCATCGA AAAAGCATCT AAAAACGGCG GAGGAACCAT CTTTTTTCCA
GCAGGAGAAT ATTTAACAGG AGCTTTAACA CTAAGAAGCA ACATTACGAT TCATTTAGAT
TCTGGAGCAC TTTTAAAGTT TTCAGAGAAC TTCGATGATT TCCTTCCTTA CGTAGAAATG
CGTTACGAAG GAATTGTAAT GAAGAGTTTC CAACCTTTAT TTTATGCTAA AGATGTACAA
AATATCACTA TTACAGGAAG AGGCGTAATC GACGGACAAG GAAAAGCGTG GTGGAATGAA
GTGTACCGAA TCGAAACGGC TAAGGAACCA CTTCCTCCAA CTAAATATCA AACTATGTGG
GAAGAGCAAA ATAAAGGCCT TTACACAGAA CCATATTACA AAAGAACGGT TGATAAAAAG
TTTTTCAGAC CTTCTTTCTT TCAGGCTTAT AATTGCAAAA ATATTTTAAT AGAAGGTGTA
ACCTTTCAAA ATTCACCTTT TTGGACAATC AACCCGGAAT TCTGTGATAA TGTAACTGTT
ACGGGAATTT CGATTTTCAA TCCACATTCA CCAAATACAG ATGGAATCAA TCCTTCTTCT
TGTACCAATG TTCACATTTC AAACTGCCAT ATCAGCGTTG GCGATGATTG TATCACGATT
AAATCAGGAA GAGACGGTGA CGGACGTAAA TATGGGAAAG CGACAGAAAA TGTAACCATT
ACAAACTGTA CGATGTTAAG TGGTCACGGC GGTGTTGTTA TTGGTAGTGA AATGTCGGGT
GGAATCAAAA AAATCACAAT ATCGAACTGT GTTTTTGATG GAACAGATCG CGGAATCCGT
ATCAAATCGG CTCGCGGAAG AGGAGGAGTT GTAGAAGATA TTCGCGTCGA TAATATCGTC
ATGAAAAACA TCAAAGAAGA AGCTATCGTT TTGAGCCTTT TCTACGATAA AGGAACTCAG
GTTGAACCTG TAACCGAGAA AACGCCGATT TTCAGAAACA TTCATATGAG CAACATTACA
GCTTCAAACG TAAATAAAGC AGGACAGATT TTGGGAATCA CCGAAATGCC AATTCAAAAC
ATCACTTTTT CTAACATCAA TATGGATGGA AAAGAAGGTT TTACAGTAAG TACGGCGACA
GATGTTGAAT TCCATGATGT AAAAGTGAAT GCAACTGTAG GTTCGTCTTT CAAAATATCA
GATTCAAAAA ATATTATTTT AGACAATGTT GGATCTTCAA CACCAATAAA AGGAGTTCCC
GTTATCAAAT TAGATAATGT TTCAAATGCG TTGATCAACA ATAATTTTCC ATTCAATCCA
ACCGATATTT TTATCGAGGC GGATGGGAAA GACACTAAAA ACATTTTCTT GAAAAACAAT
GTTTTAAACA ACGTAACAAC GAAAATCAAA AAAGGAGCTT CTTTAGATAA AAAAGCAATT
GCAGAATAA
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| Protein sequence | MKNILIILCF ITGLNTTFAN DGWLNILKEG GNNKGIKCTQ AIQNAIEKAS KNGGGTIFFP
AGEYLTGALT LRSNITIHLD SGALLKFSEN FDDFLPYVEM RYEGIVMKSF QPLFYAKDVQ
NITITGRGVI DGQGKAWWNE VYRIETAKEP LPPTKYQTMW EEQNKGLYTE PYYKRTVDKK
FFRPSFFQAY NCKNILIEGV TFQNSPFWTI NPEFCDNVTV TGISIFNPHS PNTDGINPSS
CTNVHISNCH ISVGDDCITI KSGRDGDGRK YGKATENVTI TNCTMLSGHG GVVIGSEMSG
GIKKITISNC VFDGTDRGIR IKSARGRGGV VEDIRVDNIV MKNIKEEAIV LSLFYDKGTQ
VEPVTEKTPI FRNIHMSNIT ASNVNKAGQI LGITEMPIQN ITFSNINMDG KEGFTVSTAT
DVEFHDVKVN ATVGSSFKIS DSKNIILDNV GSSTPIKGVP VIKLDNVSNA LINNNFPFNP
TDIFIEADGK DTKNIFLKNN VLNNVTTKIK KGASLDKKAI AE
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