| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4071 |
|---|
| Symbol | |
|---|
| ID | 5090797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 4860376 |
|---|
| End bp | 4862754 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644743490 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001196398 |
|---|
| Protein GI | 146301807 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACTC TTTCTGGCTG GTCTCAAACT GGAAAAATTA CAGGAAAAGT AACCTTTACC
AATAACGAAA TTGCCACAGG AGCTTCTGTA CAAATCAGCG GTACAAAAAA AAATGCCGTT
GTTGATAACA ATGGTCAATT TGAATTTAGA AACCTTTCTT ACGGAAATTA TACATTGGAT
ATTTCTTCAA TGGAAGCCCA AAACAAAAGT GTAAATATTG TTTTAAATCG TCCTTCGCAA
CAAATTACGA TTTCTCTGGA AAAAATAACG GATCCAAAAG CTTTGAACGA AGTATTGATT
CAGAAAAAAA CTGCCAAAAA AGAAATCATC GAAAAAGGCT TTTCTGTAAA TGTTATCGAA
ACTCAGGAAG CAGCCAAAAG AAATATCCAA ACTAATGATT TATTAGGACA GTCTGCGGGA
GTCAGAATCA GACAAAACGG AGGTTTAGGT TCCAGCGTAA ATTACAACCT AAACGGAATG
TCTGGCAATG CCATCCGAAT ATTTATCGAC GGAATTCCTA TTTCTACTTA CGGTTCGTCT
TTTAACTTAA ACAGTATTCC TCCTGCTTTA ATTGAAAGAA TTGAAGTTTA TAAAGGCGTA
ATTCCAGCAC ATTTAGCCGA TGATGCTTTG GGCGGTGCTA TTAATGTAAT CCTGAAAAAA
GGAGCTAAAA ATTCGTTGAA CGCTTCTGTA TCTTATGGTT CATTTAATAC CATTCAATCA
AATTTTAATA CGACATACCG CGACAAATCT GGTTTTACTT TAAAAGGATC AGGATTTTAT
AATTACTCTG ACAATAATTA TGAAATATGG GGGAAATTTG CCCGTGACGT ACAGGCAGAT
GGTGTAATGA AACAAATTCG CGCTAAACGT TTTAATGATG CTTATCGTTC TTATGGAGGC
CGTTTTGAAC TTGGTTTTAC AGATGTTGAG TGGGCTGATA CTTTTTTAGT GGGCATAAAC
ATGTCTGATG ATTATAATGA AATCCAGCAT GGTCAGGCAA TGTCTACTCC ATATAAAGGA
AGGTTTACAG AAGCAGATGC CAAAGTAATA AGCATTAATT ACGCTAAAAA AGATTTTATA
ATAAAAGGTC TTGAATTTAA TATTAATTCG GTTTTCAGCC AGAGAAATGA GGTTTTAAAC
GATACAGTAA AATGGAATTA CAACTGGTTT AACGAAAAAG CAATTGGTCT TAAAGGTCTT
CCTATTCTAA CACCAAACGG AGCACAGCAG GGAGCACCGA CAATTCTTCA TCTTAATAAT
AAAATTTTCA GTACAAGGGG CGGTTTAAAT TATTCTGTAA ATGAAAATCA CAGATTTGTA
TTCAGTACAA TGCTTTACTC ATTTATGAGA GATGATTACG ATGAAATGAA ATCTGAACTG
GAAAGAAATT TTCAGCAGAA ACGCGACCTG CAAAAAAACA TTTTATCATT TGCCTACGAA
TTTGAAGGTC TTGGTTCCCG CTTAAGAACA AATGTATTTG GTAAAAGATA CAACCAAAAA
ACGGAACAGA AAACTCCTGT TTTGACTACA ACAAACGGAC AGACTAAAAT TACCGAAAAT
CTGGAAAATA ACAATACGAC TTTCTACGGA TACGGATTTG CAGCATCTTA TTTTGTTCTG
CCTAAATTAA TGTTATCTAC ATCTGCAGAA AAGGCAATAA GACTTCCGTC TGAAAATGAA
ATTTTTGGTA ATCCGGGTGA AAATCAAACA TCAAATAGTT CATTAAAACC AGAGCAGAGT
AATAACCTAA ATGTTGGTCT TCGATTTGGT CCTTTTAAAA TTAATGAACA CAAATTCAGT
TTTTCGGGTT CAGGATTCTG GAGAAATTCT AAAGATAAAA TTGTGCGCCA GTTCAGCACC
AGAGTTAATG AGGCTCTGCA GGCAACGCCA TCTGTAAATA TGGGAACTGC ACAATCTCTT
GGCTATGAAG CTTCATTAGA ATATTCAAAT AAAAACAAAT TGTTTGTATC AATGAATATG
TCACGATTTA ATTCATTGTT CAAACTTAAA TACGATCCAA ACGGCAAAAT TTATGACAAT
TATAATAAAC AGTATCCAAA TGAACCTTAC TTCATTATAA ATACTAATGC ACAATACAAC
TTTAAAAATG TATTACAGGA AAAATCAGAA TTGAATCTAT ATTACAATTT TAGTTATGTA
GGTGAATTTT ATACAACATG GCTTCAAACA GAAATGGACA AAACTCCATC GCAGTTTCCT
CATGATCTGG GTTTAAGTTA CATATTTCCA GGCAAAAGAT ATATTGTAAG CTTTGATGCT
AAAAACATAA CCAACGAAGA GGTTTATGAC AATTTTGCGG TTCAAAAACC CGGAAGAGCT
TTCTATTTAA AAGTAAACTA CATACTCAAT AAATTTTAG
|
|---|
| Protein sequence | MITLSGWSQT GKITGKVTFT NNEIATGASV QISGTKKNAV VDNNGQFEFR NLSYGNYTLD
ISSMEAQNKS VNIVLNRPSQ QITISLEKIT DPKALNEVLI QKKTAKKEII EKGFSVNVIE
TQEAAKRNIQ TNDLLGQSAG VRIRQNGGLG SSVNYNLNGM SGNAIRIFID GIPISTYGSS
FNLNSIPPAL IERIEVYKGV IPAHLADDAL GGAINVILKK GAKNSLNASV SYGSFNTIQS
NFNTTYRDKS GFTLKGSGFY NYSDNNYEIW GKFARDVQAD GVMKQIRAKR FNDAYRSYGG
RFELGFTDVE WADTFLVGIN MSDDYNEIQH GQAMSTPYKG RFTEADAKVI SINYAKKDFI
IKGLEFNINS VFSQRNEVLN DTVKWNYNWF NEKAIGLKGL PILTPNGAQQ GAPTILHLNN
KIFSTRGGLN YSVNENHRFV FSTMLYSFMR DDYDEMKSEL ERNFQQKRDL QKNILSFAYE
FEGLGSRLRT NVFGKRYNQK TEQKTPVLTT TNGQTKITEN LENNNTTFYG YGFAASYFVL
PKLMLSTSAE KAIRLPSENE IFGNPGENQT SNSSLKPEQS NNLNVGLRFG PFKINEHKFS
FSGSGFWRNS KDKIVRQFST RVNEALQATP SVNMGTAQSL GYEASLEYSN KNKLFVSMNM
SRFNSLFKLK YDPNGKIYDN YNKQYPNEPY FIINTNAQYN FKNVLQEKSE LNLYYNFSYV
GEFYTTWLQT EMDKTPSQFP HDLGLSYIFP GKRYIVSFDA KNITNEEVYD NFAVQKPGRA
FYLKVNYILN KF
|
|---|
| |