Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3220 |
Symbol | |
ID | 5093382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3836656 |
End bp | 3838512 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644742648 |
Product | Rhs element Vgr protein |
Protein accession | YP_001195556 |
Protein GI | 146300965 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAC AAACAATAAC CACCATTAAA GTAGGCGAAA TCAGGATTAC CAATTTTAAT AAATTAAAGA TATTTCAAAC CATCCACGAC CACCATACTT TTTCATTTGA AGTAAGACAG GATTTATTAG TTGACGAGTT TAAAAGTGTG ATGCCTTTTT CCCAGAAACT GTACGGCGAG AAAATCAGCA TCGAAATAAA ACCTATAGAC GGCCTGGAAG ATCTTATGAT TGGCGCAGAC CTTAAACATT ATACCATGCA GTTCTATGGT GTTGTGACCA AAGTAAAACT GAAGAAATCC CGTGTAAAAG ATATAGAAGA AATTATCGTA ATAAAAGGAA AAAGCTCCAC GATAGCACTC GAAAACGGTC CCGAATGCAG TTCTTTTACC AATATGACCC TGAGTGATAT TGTAACCAAA GTAAAATCAG GCTGTGATAT TGATATGGAT GTAAGACCTT TTTATTTAGA AAACCTGCCT TATACGGTGC AGTATAACGA AAGTAATTTT TCTTTTCTAA ACCGTCTGGC AAAAAGAAAC GGACACTGGC TGTATTATAA CGGACGCACC ACTGTTTTTG GAAGCCCCGG CGGTGTAGGC GGACAGCCCC AGTTAGTTTA CGGGGTAAAC ATGCAGGATT TTGATTATAC CATTAAACTC CTGCCGGCAA TGTTTAAAGT AATAGAAAAT GACAACCGCG ACGGCAGTTA CAGAACCGAT GAAACCTTAA AATACAGAAG GGAAGCCGAC GGTTTTCAGC AGAATTTTTT AAATAAGTCT AATGAGTTCT TTAATAAAGA AACCATAATA CAGCTCAACC AAAATCCTGT TGGAGGATCT GCACGACGCT CCTCAGAAGA ATATGCCAAA AACAAAATGC GCGCTATTTT AAGCCGTTTA ACAGAAGTAA AAGCCTCCAG CGAAGTTCCG GGAATTACGA TAGGAAATGA AGTCAGGATA GCAGGTGTCG ACGTACAGCT GGAAAGCTCC TACCGCGTAA TACAGATAAC CCACATCTGC GACGACGGAG GCGGTTATGA AAATTATTTT ACTGCCGTAA ACTTTAACGG TTCTGTATTC TCTCCCAAAA CCGACCCTGA TTTAGTGCCG TTCTGCAGAA GCCAGACCGC CATTGTAACG GGCAATGCAG ACCCGGACGG ACTCAGCGGC ATACAGGTGC AGATGCCGTG GCAGGAAGCC AAAGGCGAAA CCACTCCTTA TATTCCCTTC GTGCAGAAAT ACGGAGGCGA TGCCAGAGGA ATCCATACGC TGCCGGAAAT TGGCGATACA GTTTTTGTGG ATTTTCAGTG TAATAATGCC GAACTGCCTA TTGCAATGGG AACCATAACC AGCAGAAAAG AAAAAAGTGG TTTCAGCACG CCTAATAATG ATCTGAAAGT GATGAGAACG CGAAGCGGAA TTGAGACTCT TCGCAATGAT GCAGAAGGGA GCTGGAAACA GAGTACGCCC GATGGAAATT ATTTACTCTT TGACGGACAA GGAAATGCAA CACTAAATGT TCTTAAAAAC TTCACTATAA ATGTTGGTGA GGATTTAAAT ATTAATGTTG AAAGGAATAT GACTGCTGAT GTTGTAAACG ATAAAACAGA TACTGTAGGT GGCAATTATA GGGAAACCAT AAATGGGTCT AAATACATAT CCATAGGTAT TGATTTTATA ATTAGGGTGA TGGGCTGTTT TAAAGAATAT GTAAAAGGTA GAATTGAATC ACACTCAGAT AAAGAGCGAA AAGAGATTGG TTTAAAAGGA GTTGAAACAA GCAGTGAAGG CTCTATTAGT AAACATGCGC AAAAAAACTT GAATAACAAT AGCGGAGAAA ATTCGACCCA CAACTAA
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Protein sequence | MALQTITTIK VGEIRITNFN KLKIFQTIHD HHTFSFEVRQ DLLVDEFKSV MPFSQKLYGE KISIEIKPID GLEDLMIGAD LKHYTMQFYG VVTKVKLKKS RVKDIEEIIV IKGKSSTIAL ENGPECSSFT NMTLSDIVTK VKSGCDIDMD VRPFYLENLP YTVQYNESNF SFLNRLAKRN GHWLYYNGRT TVFGSPGGVG GQPQLVYGVN MQDFDYTIKL LPAMFKVIEN DNRDGSYRTD ETLKYRREAD GFQQNFLNKS NEFFNKETII QLNQNPVGGS ARRSSEEYAK NKMRAILSRL TEVKASSEVP GITIGNEVRI AGVDVQLESS YRVIQITHIC DDGGGYENYF TAVNFNGSVF SPKTDPDLVP FCRSQTAIVT GNADPDGLSG IQVQMPWQEA KGETTPYIPF VQKYGGDARG IHTLPEIGDT VFVDFQCNNA ELPIAMGTIT SRKEKSGFST PNNDLKVMRT RSGIETLRND AEGSWKQSTP DGNYLLFDGQ GNATLNVLKN FTINVGEDLN INVERNMTAD VVNDKTDTVG GNYRETINGS KYISIGIDFI IRVMGCFKEY VKGRIESHSD KERKEIGLKG VETSSEGSIS KHAQKNLNNN SGENSTHN
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