| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1263 |
|---|
| Symbol | |
|---|
| ID | 5093967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1440056 |
|---|
| End bp | 1441030 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644740665 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_001193614 |
|---|
| Protein GI | 146299023 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGATA TTAGCCAGTA CCAGGATTTT TTTATTGATT ATCTAAAAAA TCAAAACATA
CACAAAGAAC CCACAAATCT TTACGAACCC ATTGAATATA TTTTAGGACT TGGCGGAAAA
CGTATGCGTC CGGTACTTAC CTTAATGGCT GCAGAAGTTT TTGATACTAA CTATAAAACG
GCTCTTCCGG CTGCAATGGC GGTTGAAGTT TTTCATAATT TTTCGCTTGT TCATGATGAT
ATTATGGATG ACGCGCCTTT AAGAAGAGGT CAAGTTACGG TTCATGAAAA ATGGGATTTA
AATACCGGAA TTCTTTCTGG AGATGCCATG CTGATCCTGG CTTACCAGTA TTTTGAACAA
TACGAGCCAG AGGTTTTTAG AGATTTAGCG AAACTTTTCA GCAAAACGGC TCTTGAAGTA
TGCGAAGGAC AGCAGTGGGA TGTTGATTTT GAACAAAGAA ACAACGTTAC GATCCCGGAA
TATTTAAAAA TGATCGAATA TAAAACCGCT GTTTTAGTTG CTGCTGCCAT GAAAATGGGT
GCAATTGTGG CTAAAACTTC TGAAAAAGAA GGCGATTTAA TTTACGATTT CGGATTGAAT
TTAGGTCTCG CTTTCCAGTT ACAAGATGAT TATTTAGATG CTTTTGGTGA TCCGGAAACT
TTTGGAAAAC AGGTTGGCGG TGATATTATC GAAAACAAAA AAACCTATTT ATATCTAAAA
GCTTTAGAAT TTTCGACTCC GGAAAAAGCT TCAGAATTAG AAAAATTATT CAGTTTGCAA
TTAGAAGATA ATTCAGAGAA AATAGAAACT GCAAAAGCTA TTTTTAACGA ATCAGGAGCT
TCAAAATCAA CTCAGGAAGC AATTGAAATG TACACTTTTA AAGCTTTTGA AACTTTAGAA
AAAATGGATA TTAACGCTGA AAAGAAAAAT ATTTTAAGAA CTTTTGGCGA AAATTTAATG
GGTAGAAAAG TTTAA
|
|---|
| Protein sequence | MHDISQYQDF FIDYLKNQNI HKEPTNLYEP IEYILGLGGK RMRPVLTLMA AEVFDTNYKT
ALPAAMAVEV FHNFSLVHDD IMDDAPLRRG QVTVHEKWDL NTGILSGDAM LILAYQYFEQ
YEPEVFRDLA KLFSKTALEV CEGQQWDVDF EQRNNVTIPE YLKMIEYKTA VLVAAAMKMG
AIVAKTSEKE GDLIYDFGLN LGLAFQLQDD YLDAFGDPET FGKQVGGDII ENKKTYLYLK
ALEFSTPEKA SELEKLFSLQ LEDNSEKIET AKAIFNESGA SKSTQEAIEM YTFKAFETLE
KMDINAEKKN ILRTFGENLM GRKV
|
|---|
| |