| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0281 |
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| Symbol | |
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| ID | 5089849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 299475 |
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| End bp | 301670 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644739675 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001192636 |
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| Protein GI | 146298045 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAA ACGAAATTGA AATACACAAG GAATTAAAGA AGTATTTCGG CTTTAGCCAA
TTTAAAGGCT TGCAGGAGCA AGTCATTACG AGTATTTTAG GTAAAACGAA TACTTTCGTA
ATTATGCCTA CGGGCGGCGG TAAGTCTCTT TGTTATCAAT TGCCCGCTTT AATTCAGGAC
GGAACAGCTA TTGTTGTTTC TCCTTTGATT GCTTTGATGA AAAACCAGGT CGATGCAATT
CGAAGCCTTT CTTCAGAAAA CGGAATTGCA CATGTGTTGA ATTCCTCTCT TACCAAAACA
GAAATTGCAC AAGTAAAAAA AGATATTAGT TCTGGTTTAA CCAAACTTTT ATATGTTGCT
CCCGAATCTT TAACAAAAGA AGAATATGTT GCTTTTTTAC AAAGTGTGCC TATTTCTTTT
GTTGCGATTG ATGAAGCGCA CTGTATTTCA GAATGGGGAC ATGATTTTAG GCCTGAGTAC
AGAAATCTTA GAACCATTAT TAAGCAATTA GGAAAAGTAC CTATTATTGG ACTTACTGCA
ACTGCAACCC CAAAAGTTCA GGAAGATATT CTTAAAAATC TGGATATGTC TGATGCAAAC
ACTTTTAAAG CATCATTTAA CAGACCTAAT TTATATTACG AAGTACGTAC AAAAACAAAA
AGTATAGAAT CGGATATTAT TCGGTTTATA AAACAACATA AAGGTAAATC TGGAATCATT
TACTGTTTAA GCCGTAAAAA GGTAGAATCG ATTGCCGAAG TGCTACAGGT AAACGGAATC
AGCGCTGTTC CTTATCACGC AGGTTTAGAT GCTAAAACCC GTGCAAAACA TCAAGACATG
TTTTTGATGG AAGATGTAGA TGTGGTGGTA GCAACAATCG CCTTCGGAAT GGGAATTGAT
AAACCAGACG TTCGTTTTGT AATTCACCAC GATATTCCAA AATCATTAGA AAGTTACTAT
CAGGAAACGG GTCGTGCCGG TCGTGATGGA GGAGAAGGAC ACTGTTTGGC TTATTACTCC
TATAAAGATG TAGAAAAGCT TGAGAAGTTC ATGTCGGGAA AACCAGTTGC CGAACAGGAA
ATTGGTTTTG CTCTTTTGCA GGAAGTGGTG GCTTACGCCG AAACTTCGAT GTCACGCCGA
AAATTCCTTC TGCATTATTT TGGAGAAGAA TTTGACAGCG AAACCGGAGA AGGTGCAGAT
ATGGATGACA ACGTTCGTAA TCCGAAAAAT AAAATTGAAG CCAAAGAACA AGTTGTAAAA
CTGCTTGAAA TTGTTCGTGA CACCAAACAT ATTTATAAGT CAAAAGAAAT TGTATTTACA
TTAATTGGCC GTATAAATGC GGTAATTAAA GCGCATAAAA CCGATACACA ATCTTATTTT
GGTTCAGGGT CAGACCATGA CGAAAAATAC TGGATGGCTT TGCTTAGACA AGTTTTAGTT
ACCGGATATT TATCTAAAGA CATTGAAACA TACGGAGTAA TTAAAATTAC TCAGGAAGGT
TTAGACTTTA TTAAAAAACC AGTTTCGTTT ATGATGTCTG AAGATCATGA ATACACAGAA
GCTGATGACG AAACTATTGT AACCGGAGGA AAATCATCTG GTACTGCCGA TGAGGTTTTA
ACCGGAATGC TTCGCGAACT TCGCAAAAAA GTTGCCAAAA AACTTGGAGT TCCTCCATTT
GTAGTTTTTC AGGATCCTTC TCTTGAAGAT ATGGCTTTAA AATATCCAAT TACTTTACAG
GAATTATATA ATATTCATGG TGTAGGTGAA GGAAAAGCTA AAAAATATGG AAGCGAATTC
GTTGCCTTAA TCAGCCGATA TGTTGAAGAC AATGATATCA TTCGTCCTGA TGATTTAGTA
GTAAAATCTA CCGGAGTAAA TTCTGCCAAT AAATTATACA TTATTCAAAA TATAGACAGA
AAACTGCCAT TGAGTGATAT TGCTTCTGCA AAAGGATTAA CGATGGATGC TTTAATAAAA
GAAATGGAGC AAATCGTTTA TTCTGGTACC AAATTAAATA TCAAATACTG GCTTGATGAT
ATTTTAGATG ATGACCAGCA GGAAGAAATT CACGACTACT TCATGGAATC AGAATCTGAT
AAAATAGAAG ATGCCTTAAA AGAATTTGAT GGTGACTACG ATATTGATGA ATTGCGTTTA
ATGCGTATTA AGTTCATCAG CGAAGTCGCT AATTAA
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| Protein sequence | MNSNEIEIHK ELKKYFGFSQ FKGLQEQVIT SILGKTNTFV IMPTGGGKSL CYQLPALIQD
GTAIVVSPLI ALMKNQVDAI RSLSSENGIA HVLNSSLTKT EIAQVKKDIS SGLTKLLYVA
PESLTKEEYV AFLQSVPISF VAIDEAHCIS EWGHDFRPEY RNLRTIIKQL GKVPIIGLTA
TATPKVQEDI LKNLDMSDAN TFKASFNRPN LYYEVRTKTK SIESDIIRFI KQHKGKSGII
YCLSRKKVES IAEVLQVNGI SAVPYHAGLD AKTRAKHQDM FLMEDVDVVV ATIAFGMGID
KPDVRFVIHH DIPKSLESYY QETGRAGRDG GEGHCLAYYS YKDVEKLEKF MSGKPVAEQE
IGFALLQEVV AYAETSMSRR KFLLHYFGEE FDSETGEGAD MDDNVRNPKN KIEAKEQVVK
LLEIVRDTKH IYKSKEIVFT LIGRINAVIK AHKTDTQSYF GSGSDHDEKY WMALLRQVLV
TGYLSKDIET YGVIKITQEG LDFIKKPVSF MMSEDHEYTE ADDETIVTGG KSSGTADEVL
TGMLRELRKK VAKKLGVPPF VVFQDPSLED MALKYPITLQ ELYNIHGVGE GKAKKYGSEF
VALISRYVED NDIIRPDDLV VKSTGVNSAN KLYIIQNIDR KLPLSDIASA KGLTMDALIK
EMEQIVYSGT KLNIKYWLDD ILDDDQQEEI HDYFMESESD KIEDALKEFD GDYDIDELRL
MRIKFISEVA N
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