Gene Emin_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1230 
Symbol 
ID6263982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1330321 
End bp1330857 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content42% 
IMG OID642611708 
Producthypothetical protein 
Protein accessionYP_001876117 
Protein GI187251635 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG GCTTTACATT AATAGAACTT CTGGTTGTTG TAACAATTAT AGCTATATTG 
GCCTTTATAG GCATTCCCCA ATATAATTTA ACTATTGAAA AAGCAAAAGC GGCCGAGGTG
CTTAAACTAT CGCGCGATAT TTATGACTCT GCGGAAAGAT ACGCTTTTCG CAATAATCTT
TCATCCGCGC AGGCGACTGA TATTTCACTT TTAGACATTA CAACCGCGGG CGATATAACA
AAAACAACAA ACCTAAATGA CACTTTAACT AATTACGCCG GGTATGTAGG CAGCTCCACT
ACCAGAGTGG TTAACAGCGT TTACAAACTT TTACCGGCAA CGGTGGAAGG AACAAGAACA
TCAGGTTTCG GCACATATAA AATTGTAATT CCCAGGCCCG GGTCCGGAGC GGCAAATGTG
GGCGCGGTGC AATGCTGGGC GCAGACAGGC ACCGATGCTA AAAAAATATG TATGGGGCTT
GGCGAAAGCA GATTACCAAC CACAACAAAC GGAAGTTTTA CTGTTTTTTA CTTATAA
 
Protein sequence
MKKGFTLIEL LVVVTIIAIL AFIGIPQYNL TIEKAKAAEV LKLSRDIYDS AERYAFRNNL 
SSAQATDISL LDITTAGDIT KTTNLNDTLT NYAGYVGSST TRVVNSVYKL LPATVEGTRT
SGFGTYKIVI PRPGSGAANV GAVQCWAQTG TDAKKICMGL GESRLPTTTN GSFTVFYL