Gene Emin_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1018 
Symbol 
ID6263066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1109474 
End bp1109959 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID642611498 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875908 
Protein GI187251426 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GATTTACCCT TATAGAACTG CTTGTAGTTG TTCTTATAAT AGGTATATTG 
GCCGCAATTG CTTTGCCGCA ATACCAAAAC TCCGTTTTAA AAAGCCGTTT TGCGCAAGCC
TATATTATGG TTAAAGCAAT GGGCGACGCG CAGGAAAGGT TTTTTTTACA GAGCGGCGCT
TATGCGGAAA AGTTTGAGGA GCTTGATATT GACATATCCG GTACGATAAC ATCTTGCGGG
GATGCGGACG AAGGGTCAGA ATGTAAACAA AACAATAATT TTATTTACCG TTTACGCGGG
CCTTCAAGCG GTATGGTTCA GGCAAGGATG GCTGTGGGAA ACAAATCCAT AGCCACGCTT
GAATATTACC CAAACAGACA GGAAAGAAAT TGCATTGTAC GCAGCAGCAG CGAACAAGGT
CATAAACTGT GTAAATCCTT AGGCGGAAAA CAATGGCCGT CAAATACGGA ATATTATACG
CTTTAA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYQN SVLKSRFAQA YIMVKAMGDA QERFFLQSGA 
YAEKFEELDI DISGTITSCG DADEGSECKQ NNNFIYRLRG PSSGMVQARM AVGNKSIATL
EYYPNRQERN CIVRSSSEQG HKLCKSLGGK QWPSNTEYYT L