| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0526 |
|---|
| Symbol | |
|---|
| ID | 6262688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | + |
|---|
| Start bp | 575687 |
|---|
| End bp | 576163 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642610996 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001875418 |
|---|
| Protein GI | 187250936 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000137512 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.350549 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTAGTTG TTTTGATTAT AGGCATACTT GCCGCTATCG CTTTGCCGCA ATATACAAAC
GCGGTAAATA AAAGCCGCGC CGTTCAATTA TATTTAGTTG CAAAAGATAT GCGCCAAGCG
CAAGACCGTT ACTTTTTGCA GCACGGGATT TATTCCGACA GTTTTGATAA CTTTGATATT
GATATCCCCG GCTCAAATAT TGCTTGTACG GACGGCGCCT CCGAATGCAG AAAAGACGGA
CGCTACCTTT ATAGGATTTG GGGGCCTTCA AGCTTGGTGC AAGCTACTCT TTTGTCAAAC
TCTAACAACG ATGGAAGCGG AGCAAACAGA ATTATTACAT TAGAATTTTA TCCCGCGGGT
TATACTCATG AAAAGAATTG TGTAACTGAT GGACCCGACA AAACCCAAGC AAGAAAGCTG
TGTCTTTCTT TAGGGGGTAA AGAGCGCAGT GACGCTCCGG GTTATTTTAA ACTTTAA
|
|---|
| Protein sequence | MVVVLIIGIL AAIALPQYTN AVNKSRAVQL YLVAKDMRQA QDRYFLQHGI YSDSFDNFDI
DIPGSNIACT DGASECRKDG RYLYRIWGPS SLVQATLLSN SNNDGSGANR IITLEFYPAG
YTHEKNCVTD GPDKTQARKL CLSLGGKERS DAPGYFKL
|
|---|
| |