Gene Elen_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2709 
Symbol 
ID8417035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3137942 
End bp3139393 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content64% 
IMG OID645025686 
ProductNa+/solute symporter 
Protein accessionYP_003183047 
Protein GI257792441 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC GCAAGCGGGT TCTTCCAACG GAGCGGGGGT CGCAGATGGT TCTATCGCCT 
ATCGACTACG TCATCATCGC GTTGTACTTC ATCGTCATCG TGGCCATCGG CTTCATCGCG
GCGCGGTTCG CGAAAACGAA GGAAGATTAC CTCGTGGCCG GCAGGCGGCT GTCGTTTCCC
CTGTTCTTCG GCTGCATGGC CGCGCTCACG CTGGGCGGCG GCTCCACTAT CGGCAGCGCC
CAGCTGGGCT ACGAGTTCGG GCTCGGCGGC ATCTGGCTCA ACCTGAGCAT CGGACTGGGG
CTCGTCGCGG CCGGCTTCCT GGTTACCAGC AAGCTTTCGA AGCTGCGCGC TCTCAGCGTG
AACGAGGTGG TGGAGAGCAG CTACGGCCCC ATCGCCCGCG TGTTCAGCTC GGCGCTCACG
CTCATCTACA CGCTCACGCT GAGCGTGGTG CAGGTCATCT CCATCGGCAC CATCATCAAC
GGCGTGACGG GCATCGACGC CACGCTGTCC ATGCTGGTAG GAGGCGGCAT CGTCATCCTG
TACACGTTCG TGGGAGGCAT GTGGTCGGTC ACCATGACCG ACATCGTGCA GTTCGTGGTG
AAAACGGTGG GCATCCTCAT CCTGGCCCCC ATCTTCTGCA TCTCGGCGGC GGGCGGCTGG
GACGCGCTCG TCAGCAAGGT GCCCGAGGCG TACCTGTCGG TGGGCAGCAT GGGCTTCGAC
AAGAGCTTCG CCTACCTCGT GCTGTACGTG CCGGGGCTCA TCATCGGCCA GGACATCTGG
CAGCGCATCT TCACCGCGAA GAACGAGAAG GTGTCGAAAA CGGGCACCGT CTGCGCGGGC
GTGTACAGCG TATTCTACGC GCTGGCCACC GTCGTCATCG GCATGAGCGT GTTCGTGCTG
CTGCCCCACC TGGACAACCC TCAGAACGCG TTCGTGGTGG GCGTGTCCAC GTTCTTGCCG
GTCGGGGTGC GCGGGCTGAT CTTGGCGGCG GCGATGGCGG CCACGATGTC GGTGTCGAGC
GGCACCATCC TGGCGTCGTC CACCATCCTG TACAACGACC TGTACCTGCG GTTCGTCCGC
AAAGGAGCGG CCCAGGGCAC GGCGCACCTC AAGGAAGTGA CCATCACGCG TCTGTTCGCC
CTGCTCATCG GCGTGGTGGT GATGGTGTGC TCGCTGTGGA TCAACGATGT GCTGGTGGGG
ATCGACATCT GCTACGGGTA CCTGTCGGGC TGCGTGTTCG TGCCGCTGGT GGCCAGTTTC
GTGCTCAAGC GGTTCAGCCC GAAAGCGGGG CTGTACGCGC TGGGCGCGAG CACCGTGGCG
GTGACGGGCT GCTTCGTCGT CGTGGGAACA GCAAGCTCAG TCCCCATCGT CGCAGGCATG
GCATCGGGGC TCGTAGCGTA CGCAGCGGCG AACCTTCTCA GCAAGCAGAA GGTGCCCTCG
CCGTTTGAAT GA
 
Protein sequence
MKARKRVLPT ERGSQMVLSP IDYVIIALYF IVIVAIGFIA ARFAKTKEDY LVAGRRLSFP 
LFFGCMAALT LGGGSTIGSA QLGYEFGLGG IWLNLSIGLG LVAAGFLVTS KLSKLRALSV
NEVVESSYGP IARVFSSALT LIYTLTLSVV QVISIGTIIN GVTGIDATLS MLVGGGIVIL
YTFVGGMWSV TMTDIVQFVV KTVGILILAP IFCISAAGGW DALVSKVPEA YLSVGSMGFD
KSFAYLVLYV PGLIIGQDIW QRIFTAKNEK VSKTGTVCAG VYSVFYALAT VVIGMSVFVL
LPHLDNPQNA FVVGVSTFLP VGVRGLILAA AMAATMSVSS GTILASSTIL YNDLYLRFVR
KGAAQGTAHL KEVTITRLFA LLIGVVVMVC SLWINDVLVG IDICYGYLSG CVFVPLVASF
VLKRFSPKAG LYALGASTVA VTGCFVVVGT ASSVPIVAGM ASGLVAYAAA NLLSKQKVPS
PFE