Gene Elen_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0561 
Symbol 
ID8414846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp713913 
End bp715148 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content65% 
IMG OID645023533 
Producthypothetical protein 
Protein accessionYP_003180935 
Protein GI257790329 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCT TTAAAACCGC GATCAAGACG GTGCTGCGGC ACCCGATGTA CCTCATCGTG 
TACGCCGGCT TCCTGAGCAT GATGGGCGTG TTCATCGCAA GCGGCCTGAC GTTCGGCGGC
ACGAACGACA GCGAGTTCTC GCCGTACGAG ACGAAGTTCG CCGTGATCGA TCGCGACGGA
AGCGCGCTGT CGGACGGGTT GGCGGCCTAC TTGCGGGAGC AGGGCATCGA AGTTCCCATC
GAAGACAGCC AGATGGCGTT GCAAGACGCC GTGGCCAAGG GTCAGAGCTC GTACATCCTC
ATCGTTCCGG AAGGGTTCGG CGACGCGTTC GTGGAAGCCG CGCGCACCGG CGACGAGCTG
CCGACGCTCG AGACGGTGTA CAGCTTCTAC TCCACCGAGG GCAGCCTGAT GGACCAGATG
GTGAATTCGT ACCTGGGCAT CGCGGGCGCG TACGCCGGCC TCGAAGGATC GGCTTCGCAG
GGCGATATCG TGCAGCACGC AGCCGAGGCC ATGGCCGAAT CGGCGGAAAC GGACAGCGTG
GAAGTGGGCG GAACCTCGTC CGAGGCGCAG CGGTTCGTGT TCTTCCTCCA ATGGGGCACC
TACACCCTGT TCGCCTCCAT CATCGTGTGC GTCGGCGTGA TGATGACCAC GCTCAACCGC
ACCGATCTGC GCCGACGCAA CCTCGTGTCG CCGCTGCCGT CCCTGTCCTA CGGGCTGCAG
CTGGCGGCGA GCAGCCTGCT GGTCATGACG GCGGTGTGGC TGTGGACGAT CTGTTTGGGA
TTCACCGTGT TCCATGAGGC TACGTCGATG ATCAGCGGTC CGGGGCTCGC GCTGATGGTC
GCGGCGTCGT TCGTGTTCGC CACGATCCCG CTTTCGGTGG GCTACCTGCT GGGTCAGCTG
GGCGTGGGAG AATTCGCCAG CAACGCCTTG GGCAACATCC TGGGCATGGT GATCTCGTTT
CTGGGCGGCG CCTGGATATC GTTCGACCTG CTGGATCCGT CCGTGCAAAT GCTGGCGCAC
TTCTCGCCCG CCTACTGGTA CACGGGCGCG CTGCAAGCAG CGGCCGACAT GGGCGCGGCC
ACGCCGGAGG CGGTGATACC CATTCTGGAG AACATGGGCG TGATGCTGCT GTTCACGGCG
GCGATATTCG CGGTGGCGCT GGTGGCGGGA CGGCTGCGCG TGCAGAGCTC GGAAGCCGGG
GGCAATGCCG CTGCGGCGCA CGCCACGCAC GGGTAG
 
Protein sequence
MQVFKTAIKT VLRHPMYLIV YAGFLSMMGV FIASGLTFGG TNDSEFSPYE TKFAVIDRDG 
SALSDGLAAY LREQGIEVPI EDSQMALQDA VAKGQSSYIL IVPEGFGDAF VEAARTGDEL
PTLETVYSFY STEGSLMDQM VNSYLGIAGA YAGLEGSASQ GDIVQHAAEA MAESAETDSV
EVGGTSSEAQ RFVFFLQWGT YTLFASIIVC VGVMMTTLNR TDLRRRNLVS PLPSLSYGLQ
LAASSLLVMT AVWLWTICLG FTVFHEATSM ISGPGLALMV AASFVFATIP LSVGYLLGQL
GVGEFASNAL GNILGMVISF LGGAWISFDL LDPSVQMLAH FSPAYWYTGA LQAAADMGAA
TPEAVIPILE NMGVMLLFTA AIFAVALVAG RLRVQSSEAG GNAAAAHATH G