Gene EcolC_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1553 
Symbol 
ID6065296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1719948 
End bp1720400 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content43% 
IMG OID641600969 
ProductPTS system galactitol-specific transporter subunit IIA 
Protein accessionYP_001724539 
Protein GI170019585 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACC TGTTTGTTCG TAGCGGAATT TCTTTTGTCG ATCGTAGCGA AGTTTTAACC 
CATATCGGTA ATGAGATGCT CGCCAAAGGT GTGGTTCATG ATACCTGGCC ACAGGCATTA
ATTGCCAGAG AAGCAGAATT CCCTACCGGG ATAATGCTTG AGCAGCACGC TATTGCAATA
CCGCATTGTG AGGCGATTCA TGCTAAGTCG TCAGCCATTT ATCTGTTAAG GCCAACAAAT
AAAGTTCATT TTCAGCAAGC GGATGATGAT AACGACGTGG CGGTATCGTT GGTTATTGCG
TTGATTGTGG AAAATCCGCA GCAGCAATTG AAACTTTTAC GCTGTTTATT TGGCAAGTTA
CAACAGCCCG ATATCGTCGA GACACTAATC ACTCTTCCTG AAACCCAGTT AAAGGAATAC
TTCACAAAGT ATGTTTTAGA TTCAGACGAA TAA
 
Protein sequence
MTNLFVRSGI SFVDRSEVLT HIGNEMLAKG VVHDTWPQAL IAREAEFPTG IMLEQHAIAI 
PHCEAIHAKS SAIYLLRPTN KVHFQQADDD NDVAVSLVIA LIVENPQQQL KLLRCLFGKL
QQPDIVETLI TLPETQLKEY FTKYVLDSDE