| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4630 |
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| Symbol | |
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| ID | 6143377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4730709 |
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| End bp | 4734032 |
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| Gene Length | 3324 bp |
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| Protein Length | 1107 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641619446 |
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| Product | hypothetical protein |
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| Protein accession | YP_001746557 |
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| Protein GI | 170682564 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.250026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0442574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCTGA TTATCACTTT TCTGATGGCC TGGTGCCTCA GTTGGGGGGC GTACGCCGCG
ACGGCCCCCG ATAGCAAACA AATCTCACAA GAACTGGAGC AGGCAAAAGC GGCGAAACCC
GCGCAACCGG AAGTCGTAGA GGCGCTCCAG TCTGCCTTAA ATGCGCTTGA GGAACGGAAA
GGTTCCCTTG AGCGCATCAA GCAATATCAA GAAGTCATTG ATAATTATCC GAAACTCTCC
GCTACTCTGC GCGCGCAATT AAACAACATG CGTGACGAGC CGCGCAGCGT GTCACCGGGA
ATGTCTACCG ACGCGCTGAA TCAGGAAATT CTCCAGGTCA GCAGCCAGTT GCTGGATAAA
AGCCGTCAGG CCCAGCAAGA GCAGGAACGC GCCCGCGAGA TTGCCGATTC GCTGAATCAA
CTGCCGCAAC AGCAAACCGA TGCCCGCCGT CAGTTAAATG AAATCGAGCG CCGCCTGGGG
ACGCTTACCG GCAATTCCCC GCTCAATCAG GCACAAAATT TCGCGTTGCA GTCTGACTCC
GCACGCCTGA AAGCGCTCGT CGATGAACTG GAACTGGCGC AGCTGTCCGC CAATAACCGC
CAGGAATTAG CGCGCTTACG CTCAGAGCTG GCGGAAAAAG AGAGCCAGCA ACTGGATGCA
TATTTGCAGG CCTTACGTAA TCAGTTGAAC AGCCAACGTC AGCTTGAGGC GGAGCGGGCG
CTGGAAAGTA CCGAATTACT GGCAGAAAAC AGTGCCGATT TGCCGAAAGA TATCGTCGCG
CAATTCAAAA TTAACCGCGA ACTATCGGCA GCGCTGAATC AACAGGCGCA GCGGATGGAT
CTCGTTGCCT CGCAACAGCG TCAGGCTGCC AGCCAGACGT TACAGGTCCG GCAGGCGTTG
AATACGCTGC GTGAACAGTC GCAATGGCTG GGCTCGTCCA ACCTGCTCGG CGAAGCGTTG
CGGGCGCAGG TGGCACGGCT GCCGGAAATG CCAAAACCAC AACAGCTTGA TACCGAAATG
GCGCAGTTGC GTGTGCAACG GTTACGTTAT GAGGATCTGC TTAATAAACA GCCGCAGCTA
AGGCAAATTC ATCAGGCCGA CGGTCAGCCG CTGACCGCCG AGCAAAACCG TATTCTGGAA
GCACAGCTAC GCACTCAGCG TGAGTTGCTG AACTCATTGT TGCAGGGTGG CGACACGCTA
CTACTGGAAC TGACCAAGCT GAAAGTCTCC AACGGGCAAC TGGAGGATGC GCTGAAAGAG
GTGAATGAAG CGACGCACCG CTATCTGTTC TGGACCTCTG ACGTGCGCCC GATGACCATC
GCCTGGCCGC TGGAAATCGC CCAGGATCTG CGTCGTCTCA TTTCGCTGGA CACCTTCAGT
CAGTTGGGCA AAGCCAGTGT GATGATGCTG ACCAGTAAAG AGACAATTTT ACCGCTGTTT
GGCGCGTTGA TTCTGGTCGG TTGCAGTATT TACTCACGCC GCTATTTCAC CCGTTTTCTT
GAACGTTCGG CGGCGAAAGT CGGCAAAGTG ACTCAGGATC ACTTCTGGCT GACGTTACGC
ACTCTTTTCT GGTCGATTCT CGTCGCGTCA CCGCTACCGG TGCTGTGGAT GACGCTGGGT
TACGGCTTGC GCGAGGCGTG GCCTTATCCG CTGGCGGTCG CGATTGGCGA TGGTGTAACG
GCCACCGTGC CGCTGCTGTG GGTAGTGATG ATTTGCGCTA CCTTTGCCCG CCCGAACGGC
TTGTTTATCG CTCATTTTGG CTGGCCGCGC GAACGCGTTT CCCGTGGGAT GCGCTACTAC
CTGATGAGCA TCGGGCTTAT TGTGCCACTG ATTATGGCGC TGATGATGTT CGATAACCTC
GACGACCGCG AATTTTCCGG TTCGCTGGGA CGGCTTTGCT TTATCCTCAT TTGCGGTGCG
CTGGCGGTGG TCACCCTCAG CCTGAAAAAG GCCGGGATCC CGCTGTATCT CAACAAAGAA
GGCAGCGGCG ACAACATTAC CAACCATATG CTGTGGAACA TGATGATTAG CGCACCGCTG
GTCGCTATTC TGGCGTCGGC GGTGGGTTAT CTGGCAACGG CGCAGGCACT GTTAGCGAGG
CTTGAAACCT CGGTTGCCAT CTGGTTCCTG CTACTGGTGG TTTATCACGT TATCCGCCGC
TGGATGCTGA TCCAGCGCCG CAGGCTGGCG TTTGACCGGG CGAAGCATCG CCGGGCAGAG
ATGTTAGCGC AACGTGCGCG TGGCGAAGAG GAAGCGCATC ATCACAGTAG CCCGGAAGGA
GCAATTGAAG TCGATGAAAG CGAAGTCGAT CTCGATGCCA TCAGTGCGCA ATCCTTGCGG
CTGGTGCGCT CAATTTTGAT GTTGATCGCC CTGCTTTCGG TCATTGTGCT GTGGTCAGAA
ATCCATTCCG CTTTCGGCTT CCTCGAAAAT ATTTCGCTGT GGGATGTCAC TTCCACGGTA
CAGGGCGTAG AAAGCCTGGA GCCGATTACC CTCGGTGCGG TACTGATTGC CATTCTGGTG
TTTATCATCA CCACGCAGCT GGTGCGCAAC CTGCCCGCGC TGCTGGAACT GGCGATTCTG
CAGCACCTGG ATTTAACGCC GGGTACGGGC TACGCCATCA CCACCATCAC CAAATATCTG
CTGATGCTGA TTGGCGGGCT GGTCGGCTTC TCGATGATTG GTATTGAGTG GTCGAAATTG
CAGTGGCTGG TCGCCGCGCT CGGTGTTGGT CTCGGTTTTG GTTTGCAGGA AATTTTCGCC
AACTTTATCT CTGGCCTGAT TATCCTGTTC GAAAAACCGA TTCGCATTGG CGATACGGTA
ACGATCCGCG ATCTTACCGG TAGTGTGACG AAAATTAACA CCCGCGCCAC CACCATCAGC
GACTGGGACC GCAAAGAAAT TATCGTGCCG AACAAGGCGT TTATTACCGA GCAGTTTATC
AACTGGTCGC TCTCTGACTC GGTCACGCGC GTGGTGTTGA CGATTCCGGC CCCTGCCGAT
GCCAACAGTG AAGAAGTGAC GGAAATCCTG CTCACCGCAG CGCGTCGCTG CTCGCTGGTG
ATCGACAACC CGGCACCGGA AGTCTTCCTG GTGGATCTGC AACAGGGGAT TCAGATTTTC
GAGCTGCGTA TTTACGCCGC AGAAATGGGT CACCGCATGC CGCTACGCCA TGAGATTCAC
CAGCTAATTC TGGCAGGCTT CCATGCCCAC GGTATCGATA TGCCATTCCC GCCCTTCCAG
ATGCGTCTGG AAAGCCTGAA TGGTAAACAA ACGGGGAGAA CATTAACTTC TGCGGGCAAA
GGTCGTCAGG CGGGAAGTTT GTAA
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| Protein sequence | MRLIITFLMA WCLSWGAYAA TAPDSKQISQ ELEQAKAAKP AQPEVVEALQ SALNALEERK
GSLERIKQYQ EVIDNYPKLS ATLRAQLNNM RDEPRSVSPG MSTDALNQEI LQVSSQLLDK
SRQAQQEQER AREIADSLNQ LPQQQTDARR QLNEIERRLG TLTGNSPLNQ AQNFALQSDS
ARLKALVDEL ELAQLSANNR QELARLRSEL AEKESQQLDA YLQALRNQLN SQRQLEAERA
LESTELLAEN SADLPKDIVA QFKINRELSA ALNQQAQRMD LVASQQRQAA SQTLQVRQAL
NTLREQSQWL GSSNLLGEAL RAQVARLPEM PKPQQLDTEM AQLRVQRLRY EDLLNKQPQL
RQIHQADGQP LTAEQNRILE AQLRTQRELL NSLLQGGDTL LLELTKLKVS NGQLEDALKE
VNEATHRYLF WTSDVRPMTI AWPLEIAQDL RRLISLDTFS QLGKASVMML TSKETILPLF
GALILVGCSI YSRRYFTRFL ERSAAKVGKV TQDHFWLTLR TLFWSILVAS PLPVLWMTLG
YGLREAWPYP LAVAIGDGVT ATVPLLWVVM ICATFARPNG LFIAHFGWPR ERVSRGMRYY
LMSIGLIVPL IMALMMFDNL DDREFSGSLG RLCFILICGA LAVVTLSLKK AGIPLYLNKE
GSGDNITNHM LWNMMISAPL VAILASAVGY LATAQALLAR LETSVAIWFL LLVVYHVIRR
WMLIQRRRLA FDRAKHRRAE MLAQRARGEE EAHHHSSPEG AIEVDESEVD LDAISAQSLR
LVRSILMLIA LLSVIVLWSE IHSAFGFLEN ISLWDVTSTV QGVESLEPIT LGAVLIAILV
FIITTQLVRN LPALLELAIL QHLDLTPGTG YAITTITKYL LMLIGGLVGF SMIGIEWSKL
QWLVAALGVG LGFGLQEIFA NFISGLIILF EKPIRIGDTV TIRDLTGSVT KINTRATTIS
DWDRKEIIVP NKAFITEQFI NWSLSDSVTR VVLTIPAPAD ANSEEVTEIL LTAARRCSLV
IDNPAPEVFL VDLQQGIQIF ELRIYAAEMG HRMPLRHEIH QLILAGFHAH GIDMPFPPFQ
MRLESLNGKQ TGRTLTSAGK GRQAGSL
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