| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3943 |
|---|
| Symbol | |
|---|
| ID | 6144093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4022432 |
|---|
| End bp | 4022905 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641618769 |
|---|
| Product | putative tRNA/rRNA methyltransferase YibK |
|---|
| Protein accession | YP_001745908 |
|---|
| Protein GI | 170680159 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAACA TCGTACTTTA CGAACCAGAA ATTCCGCCAA ATACTGGCAA CATCATCCGT
CTTTGCGCTA ATACCGGCTT TCGTCTGCAT ATCATCGAAC CGATGGGATT TGCCTGGGAC
GATAAGCGCC TGCGCCGCGC GGGGCTGGAC TATCACGAGT TTACCGCCGT TACGCGTCAT
CATGACTATC GCGCGTTCCT CGAAGCAGAA AATCCCCAGC GCCTGTTTGC CCTCACCACG
AAAGGTACGC CTGCTCACAG CGCCGTAAGC TATCAGGATG GCGATTATCT GATGTTCGGC
CCGGAAACAC GCGGCCTGCC AGCGAGCATT CTTGATGCCC TGCCCGCTGA ACAAAAAATT
CGTATTCCAA TGGTGCCGGA CAGCCGCAGC ATGAATCTGT CCAATGCGGT GTCGGTCGTG
GTGTATGAAG CCTGGCGGCA GTTGGGGTAT CCGGGAGCGG TGTTGAGAGA TTAG
|
|---|
| Protein sequence | MLNIVLYEPE IPPNTGNIIR LCANTGFRLH IIEPMGFAWD DKRLRRAGLD YHEFTAVTRH
HDYRAFLEAE NPQRLFALTT KGTPAHSAVS YQDGDYLMFG PETRGLPASI LDALPAEQKI
RIPMVPDSRS MNLSNAVSVV VYEAWRQLGY PGAVLRD
|
|---|
| |