| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3389 |
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| Symbol | |
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| ID | 6147234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3475708 |
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| End bp | 3476424 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641618218 |
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| Product | putative CFA/I fimbrial subunit A |
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| Protein accession | YP_001745367 |
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| Protein GI | 170681823 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCGA AAATTAATCG ATTATTACGG CTCGGGCCTG TCTTACTTCT GTGCACATCA
TTTTTCGCAC AATCTAATAT GACTGTATAT CCTATGTCTG TATCTATAAA CAGTCAGGGA
GAAGGAAGTG TTCGTGTAAT ATCGAAAACG AATGAAGTCC AATATATAAA GGCAACCGTA
TTTCGTATCG ATAATCCATC AACACCACAA GAAAAAGAAA TCGAAGTAAC TTCAGGCGAT
GCAAACCAAC TTGTGATAAT GCCGCCCAAA TTTGCTTTGC CTGGCGGTAG TAGCAAAACC
GTGCGTTTTG TGGCAATGGA ACCTGAGCAA AAAGAAAAAA ACTATCGGGT TAAATTTGAA
GCTGTACCCA GCATTGATGA TGCAACAGAT AATAAAAAAG ATCTCTCCAT GCAATTAACG
GTTAACTTAA TTTGGGGGAT TGTTGTCAGC GTGCCACCTC AGCAGCCTGT GGCAAAGTTA
GATATTAACG CCGATAAAAA GCTAATCAAT AATGGCAATC AACGTCTGAA GATATTAACC
ATTGCCTATT GTAAAAATAG TGGTTCTGCG GAGTGCAGAA CACAGACCGT AAATAAAAAC
ATTTTCCCTG GTCAGGAAAG AGTTTTAGAA AGCATATCTG GCTACGATAA AATCGTTGTC
AAATATAATA ACTGGATCAC CAAGGACAAT GGCGAGTTTG AGCTGGCGGT CCATTAA
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| Protein sequence | MVAKINRLLR LGPVLLLCTS FFAQSNMTVY PMSVSINSQG EGSVRVISKT NEVQYIKATV
FRIDNPSTPQ EKEIEVTSGD ANQLVIMPPK FALPGGSSKT VRFVAMEPEQ KEKNYRVKFE
AVPSIDDATD NKKDLSMQLT VNLIWGIVVS VPPQQPVAKL DINADKKLIN NGNQRLKILT
IAYCKNSGSA ECRTQTVNKN IFPGQERVLE SISGYDKIVV KYNNWITKDN GEFELAVH
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