| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3236 |
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| Symbol | |
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| ID | 6145201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3308800 |
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| End bp | 3309999 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641618066 |
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| Product | IS200 transposase orfB |
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| Protein accession | YP_001745216 |
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| Protein GI | 170682393 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.48969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAATCC TGAAAGCCTA CAAATTCAGA CTGGAACCAA CGCATGAGCA GTCGCAGCGT
TTGCGGCAGT TATGTGGTTG TGCCCGTTTT GTCTGGAATT TAGGTCTTGC GGAGACAAAG
CGCATACTTG GCTCAGGCGA AAAGTTACCT TCGGCTTTCG AGTTGAATCG GATGATTACA
GTGTGGAAAA AAATGCCGGA ATACATCTTC TTACAGGATG CTTATACCGA CAATCTGCAA
CAAAAGCTGA AAGACCTGCA TACCGCATGG AAACGTTGTT TTGATAAAAA GCTCGCAGCT
AAGGCTCCGG TATGGAAACG AAAAAATGAG GGCAGAGACT CAATCCGTTT TGTGAACTTT
GAGAAATATT GCTGCCTTGA AAATCGCAGA GTGAAGCTAC CGTCAGGTCT TGGGTGGGTA
AAATTCCGGC AATCTCAACG TGTGAACGGT AAAATCAAAA ATGCGACAAT CAGTCAGTTA
GCGGGACAGT GGTATATCTC GTTTCAGGTT GAAATTGAAA CGGCAGAACC AAATCACACA
AGCACAACGA TAGTCGGACT GGATGCAGGC GTGGCTAAAC TTGCCACGCT GTCAGATGGC
ACAGTCTTTG AGCCTGTAAA CAGTTTTCAG AAAAATCAGA AGAAGCTGGC GAGACTCCAG
CGACAGTTAA GCCGCAAGGT CAAATTCAGC AACAACTGGC AGAAGCAGAA ACGCAAAATA
CAGCGACTGC ATTCCTGTAT CGCAAATATC CGCAGGGACT ACCTTCACAA AGTCACAACG
ACCGTCAGCA AAAACCACGC AATGATAGTC ATTGAGGATT TGAAGGTCAG CAACATGTCA
AAGTCGGCAG CGGGTACGGT CAGCCAGCCG GGGCGCAATG TCCGGGCAAA ATCAGGTTTA
AACCGTTCGA TACTGGATCA GGGCTGGTAT GAAATGCGCC GCCAGCTTGA GTACAAACAG
CTCTGGCGTG GTGGTCATGT AGAGGCGGTA AATCCGGCAT ACACAAGCCA GCGTTGTTCG
TGTTGCGGTC ATACGGAAAA AGCAAATCGT CGCACACAAA GTAAGTTTGA GTGCAAAGCA
TGTGGGTATG CTGAAAATGC GGACGTAAAC GCAGCACGAA ACATTTTAGC GACGTGGCAC
GCTCAAATGG CTACAAGTAC CGCGGGACAC GCGGAAACCG GGAGTCTGTC TCTGGGATAG
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| Protein sequence | MLILKAYKFR LEPTHEQSQR LRQLCGCARF VWNLGLAETK RILGSGEKLP SAFELNRMIT
VWKKMPEYIF LQDAYTDNLQ QKLKDLHTAW KRCFDKKLAA KAPVWKRKNE GRDSIRFVNF
EKYCCLENRR VKLPSGLGWV KFRQSQRVNG KIKNATISQL AGQWYISFQV EIETAEPNHT
STTIVGLDAG VAKLATLSDG TVFEPVNSFQ KNQKKLARLQ RQLSRKVKFS NNWQKQKRKI
QRLHSCIANI RRDYLHKVTT TVSKNHAMIV IEDLKVSNMS KSAAGTVSQP GRNVRAKSGL
NRSILDQGWY EMRRQLEYKQ LWRGGHVEAV NPAYTSQRCS CCGHTEKANR RTQSKFECKA
CGYAENADVN AARNILATWH AQMATSTAGH AETGSLSLG
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