| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1958 |
|---|
| Symbol | |
|---|
| ID | 6142645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1980286 |
|---|
| End bp | 1981593 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641616834 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001744010 |
|---|
| Protein GI | 170682033 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.272689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.538677 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATC TCAGCCCGCA AAAATTCAGC TGGGGTGATG CCCCCTGGCA GATCATTGAC
CTTAGTACCG CGGGCAAAGT GAACATACAG GTGGACAACA ATACCATCAT CACGTTGGGG
ACTCCCCTGA ATCAGCAACA TAACGAGTTC ATGATGGTCG CCAAATGGTG CGAATGGGCT
ATACAGCAGG ATGGTTTGCA AGAAAACCTG CAAAAAAAAC TGCACGAGGT CCTGGAAGAA
AACCGGCAAA ACAAACAGTC AGAAATTCCC CAAGAAGACC TGAAAGAAAG GCTGAAAGAA
ATCAAGGAAG ATATCCTGAA AGAAAACCAG TCAGCAAGCC AGATTGAAGA CCGGGCAGAA
GCATTGCGCA GAATGAAGGA ATGTCTCATA ACAAGACAGA GTATGCTCGA TCTTAGCAAC
CTTGGACTGA CTTCACTCCC TGAAAATTTG CCTCCACATC TGATTGAATT TAACTGCAGT
AGAAACATGT TGACCGCGTT ACCGGAGGTA ATGCCAAAGG GGCTGAGAGT GCTTGAATGT
ATGGAGAACT TTTTGATCTT GTTACCGAAG GTGCAGCCCC CGAAACTGAT GGTACTGAAG
TGCTATGAAA ACTATATTAT CTGGCTGCCT GAGCTGTCGA CTAACCTGAG AGTGATTGAC
TGTTCTGAAA ACTTCTTGCA ATTTTTACCG CCGTCGATGC CCCAGTACCT GTATACACTG
CGCTGTGCTT TCAACAGTAT TAGCTTAATA CCTGATGAGA TGCTGGAGAA CTTGACTCGC
CTGAAGGTAT TTGACTGTTC TAGTAACGAT TTGATCTCTT CACCACGGCT GCCGCCCAAA
CTAATCATAT ACTACTGTGG AGAAAACCAG TTTAAAACTG TACCGGTGCC GCAGCCCCGA
AGCCTGAAGG TGTTTAGCTG TAATGGTAAC CCGTGGGACA AAGACAATTT ACCGACGCTG
CTCAAAGCCG TCGAGGGCCT GAAAAACCAG GAGGGTCTGG AGGAGCTTTT GGACTTTTTG
CACAAGGAAG GTCTGGTTGA CCTGGAAGGA CTCGAGGAGC TGGAGGACCT GGATGACCTT
ATGGATCTGG AGTTCCTGGA TGACCCGGAA CTCCTGGAGC GCGTGAAGGT ACAGGAGGAC
CTGGAGCTCC TGGATCAACA GTTGGGCCTG TTGAGTCTGG AAAAACAACA GGACTCGCAG
CCTGTTAATC AACAATCTGA ACATGAACCC GAATCTGCAT CAAAGGTGAA GCGTGATTTA
TCTGAAGTCG ACTCCGAGTC AACAATGAAG CGTAAGCGTT TTATGTAG
|
|---|
| Protein sequence | MKYLSPQKFS WGDAPWQIID LSTAGKVNIQ VDNNTIITLG TPLNQQHNEF MMVAKWCEWA
IQQDGLQENL QKKLHEVLEE NRQNKQSEIP QEDLKERLKE IKEDILKENQ SASQIEDRAE
ALRRMKECLI TRQSMLDLSN LGLTSLPENL PPHLIEFNCS RNMLTALPEV MPKGLRVLEC
MENFLILLPK VQPPKLMVLK CYENYIIWLP ELSTNLRVID CSENFLQFLP PSMPQYLYTL
RCAFNSISLI PDEMLENLTR LKVFDCSSND LISSPRLPPK LIIYYCGENQ FKTVPVPQPR
SLKVFSCNGN PWDKDNLPTL LKAVEGLKNQ EGLEELLDFL HKEGLVDLEG LEELEDLDDL
MDLEFLDDPE LLERVKVQED LELLDQQLGL LSLEKQQDSQ PVNQQSEHEP ESASKVKRDL
SEVDSESTMK RKRFM
|
|---|
| |