Gene EcSMS35_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1710 
Symbol 
ID6146169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1718136 
End bp1719029 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content51% 
IMG OID641616586 
Producthypothetical protein 
Protein accessionYP_001743764 
Protein GI170682607 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.941652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.175263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGC AGGTTTACCA CGTCGATGCT TTTACCTCTC AACCGTTTCG CGGCAATTCT 
GCCGGTGTTG TTTTCCCCGC CGATAATCTT AGCGAAGCGC AAATGCAGCT TATCGCCCGC
GAGTTAGGTC ATTCGGAAAC TGCTTTTCTG CTGCACAGCG ACGACAGCGA TGTGCGCATC
CGCTACTTTA CGCCAACGGT TGAAGTTCCG ATTTGTGGTC ACGCGACAGT AGCTGCGCAC
TATGTACGTG CAAAGGTGTT AGGTTTAGGA AATTGCACCG TCTGGCAAAC GTCGCTGGCA
GGAAAACATC GTGTGACTAT CGAAAAGCAA AATGATGATT ATCGTATTTC GCTGGAGCAA
GGTACGCCGG GCTTTGAACC ACCGCTGGAA GGTGAAACAC GTGCAGCGAT TATCAACGCG
CTTCATCTCA CTGAAGACGA TATTTTGCAA GGCTTGCCAA TCCAGGTGGC TACCACAGGA
CACTCAAAAG TGATGATTCC ACTGAAGCCG GAAGTGGATA TCGACGCCCT TTCGCCTGAC
CTTGCTGCGC TGACCACAAT CAGCAAACAG ATTGGCTGCA ATGGTTTCTT CCCGTTCCAG
ATCCGCCCAG GCAAAAACGA AACCGATGGT CGCATGTTCT CGCCTGCGAT TGGTATTGTG
GAAGATCCGG TGACTGGCAA TGCCAATGGC CCGATGGGTG CATGGTTAGT ACATCACAAC
GTATTGCCAC ACGATGGCAA CGTGTTGCGT GTTAAAGGCC ATCAGGGGCG CGCATTAGGG
CGTGACGGCG TGATTGAAGT GACGGTGACA ATTCGTGATA ACCAACCGGA GAAAGTCACC
ATTTCTGGCA CGGCGGTGAT TTTGTTTCAT GCCGAATGGG CAATTAAACT CTGA
 
Protein sequence
MKPQVYHVDA FTSQPFRGNS AGVVFPADNL SEAQMQLIAR ELGHSETAFL LHSDDSDVRI 
RYFTPTVEVP ICGHATVAAH YVRAKVLGLG NCTVWQTSLA GKHRVTIEKQ NDDYRISLEQ
GTPGFEPPLE GETRAAIINA LHLTEDDILQ GLPIQVATTG HSKVMIPLKP EVDIDALSPD
LAALTTISKQ IGCNGFFPFQ IRPGKNETDG RMFSPAIGIV EDPVTGNANG PMGAWLVHHN
VLPHDGNVLR VKGHQGRALG RDGVIEVTVT IRDNQPEKVT ISGTAVILFH AEWAIKL