| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1688 |
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| Symbol | yddQ |
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| ID | 6146099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1692239 |
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| End bp | 1693135 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616564 |
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| Product | ATP-dependent peptide transporter membrane subunit |
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| Protein accession | YP_001743742 |
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| Protein GI | 170681230 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.175944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTAA GCGAGGAAAC GTCAGCCGTG CGCCCACCAA AACAAACGCG ATTTAACGGT
GCAAAACTGG TATGGATGCT GAAAGGCAGC CCGCTCACCG TGACCGGCGC AGTCATCATT
GTATTAATGC TATTGATGAT GATTTTTTCA CCGTGGCTGG CGACGCATGA TCCCAACGCC
ATTGATTTAA CCGCCCGCCT TTTGCCGCCT TCTGCGGCGC ACTGGTTTGG CACCGATGAA
GTGGGACGCG ATCTGTTCAG CCGCGTACTG GTCGGCAGTC AGCAATCAAT TCTCGCCGGA
TTAGTGGTGG TCGCCATTGC AGGTATGATG GGGTCGCTAC TCGGGTGTCT ATCCGGTGTG
CTTGGCGGAC GCGCAGACGC GATTATCATG CGCATCATGG ACATTATGCT GTCGATTCCT
TCGCTGGTAC TGACAATGGC ACTGGCAGCC GCTCTCGGGC CGAGTTTGTT TAACGCCATG
CTGGCGATTG CTATTGTACG AATTCCCTTT TATGTGCGCC TGGCGCGGGG GCAAACATTA
GTTGTTCGCC AGTATACCTA TGTTCAGGCG GCGAAAACCT TTGGTGCGTC GCGTTGGCAT
CTGATCAACT GGCATATTTT ACGTAACTCC CTGCCGCCGC TGATTGTGCA GGCATCGCTG
GATATCGGTA GCGCGATTTT AATGGCCGCC ACGTTGGGAT TTATTGGCCT TGGTGCTCAA
CAACCGAGTG CTGAATGGGG GGCGATGGTG GCGAATGGTC GCAACTATGT GCTCGATCAA
TGGTGGTATT GCGCATTTCC GGGGGCAGCG ATTTTGCTTA CCGCCGTCGG GTTTAATCTC
TTTGGCGATG GTATTCGCGA TCTGCTTGAC CCGAAAGCAG GAGGAAAGCA GTCATGA
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| Protein sequence | MMLSEETSAV RPPKQTRFNG AKLVWMLKGS PLTVTGAVII VLMLLMMIFS PWLATHDPNA
IDLTARLLPP SAAHWFGTDE VGRDLFSRVL VGSQQSILAG LVVVAIAGMM GSLLGCLSGV
LGGRADAIIM RIMDIMLSIP SLVLTMALAA ALGPSLFNAM LAIAIVRIPF YVRLARGQTL
VVRQYTYVQA AKTFGASRWH LINWHILRNS LPPLIVQASL DIGSAILMAA TLGFIGLGAQ
QPSAEWGAMV ANGRNYVLDQ WWYCAFPGAA ILLTAVGFNL FGDGIRDLLD PKAGGKQS
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