Gene EcSMS35_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1070 
Symbol 
ID6143973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1081213 
End bp1083609 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content52% 
IMG OID641615957 
Producthypothetical protein 
Protein accessionYP_001743149 
Protein GI170682670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0611355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAA AGAACATCGC CCTGCTTTGT GATGAAGCCG ACCGACTTTT GCAACTGAAC 
ATTAATCTGC TCCGGCAAAT GGTTGAGGAG CCAGATGTGT TATCTGACAG TAAGAACGAA
AACAGACTGC TTTTTGATAA ACAGAAAGCA CTGAAAAGAA TTGAGGAGCT GGAGGGCGAA
CAAATCAAAA CCGCCCGCAG GGAGATGGTG CTGGCTGTTG TCGGCACGAT GAAAGCAGGC
AAATCAACCA CCATCAACGC CATTGTGGGG CAGGAAATTC TGCCTAACCG TAACCGCCCC
ATGACCTCTG TACCGACGCT CATCCGCCAC GTTCCCGGAA AAACTGAGCC GGTTCTCCAT
CTGGAACATA TTCAGCCTGT CCGCAATTTA TTAATCACAC TGCAGGAAAA ACTCGCCACC
CCGGCAGGAC AGCAGGTCGC ACAGACCCTG CAGCAAACCG GGGATACCCG CGAACTGCTG
GATATTCTGA CGGATGATGG CTGGCTCAAA AATGAATACC ACGGGGAGGA GGAAATCTTT
ACCGGACTGG CATCGTTAAA CGATCTGGTT CGTCTTGCTG CGGCAATGGG GACTGAATTT
CCTTTTGATG AATACGCAGA AGTGCAGAAA CTGCCGGTGA TCGACGTGGA ATTCAGCCAT
CTGGTGGGGA TGGATGCATG CCAGGGAACA CTCACACTGC TGGATACCCC CGGCCCTAAT
GAGGCCGGAC AACCGCAGAT GGAAGTGATG ATGCGGGATC AACTGCAGAA AGCCTCTGCG
GTTCTGGCTG TGATGGATTA CACCCAGATG AACTCAAAAG CGGATGAAGA CGTCCGTAAA
GAGCTTAATG CCATTGCTGA CGTATCAGCC GGCCGCCTGT TTGTACTGGT CAATAAATTT
GATGAGAAAG ACCGCAATGG CGATGGGGCA GATGCCGTAC GCCAGAAAGT TCCGGCAATG
CTGAACAGCG ATGTGCTGCC CGCCTCCCGC GTTTATCCCG GATCCTCACG CCAGGCATAC
CTGGCTAACC GTGCGCTTCA TGAGTTACGG AAAAACGGAA CCCTTCCTGT TGATGAAGCC
TGGGTCGATG ATTTTATCAG AGGTGCCTTC GGTTGCATGA AAAAAGAATA CGTCTGTAAA
GACAGTGAAC TGGCAACTGA AGGGGCGACA GACCTGTGGG AAGGCTCACT TATCGATCAA
CTGATAACGG AAGTCATACA GAGCTCACAT TCCAGAGCTG CGGCACTGGC GGTTGACTCT
GCCGCCGCAA AACTGATGCA GAATGCAGAA AATATCAGTG AATACCTGTT GTTACGCCAT
CAGGGGCTAC AGCAAAGCAT TCAGTCACTG CAGTCGCATA TCACCAGCCT GCTTGCGGAT
ATCCGGGAAA TCGCGGACTG TCAGGAGCAG ATGACCACTG ATGTCAGAAT GGCCATGGAG
GAGATCGATA CTAAAACCCG GGAATTACTG ACGGGGGTCT GCACCTCACT GGAAGAGGAG
CTGAATGACT ATTTCAGAAG CGGTAAACGC AAAGAACAGC AAATGCTGGA GGAAGAAGAC
GCAGAACAAC GAAGGTCTCA GTCCGGATTA TGGGGGAAAA TTTCTCAATG GTCCGGTATC
AACAACCAGG GCCGGGAGGA TTACAGGAAA CGAGATTTTG CCCCGGACAG CCCCGAAATA
AAATTCAGTG ATCGCAGGGA AGCCCTTGAA CTGATGACGC AAATCGAATC GACCGTGACC
AGCCTGCACC GTGAGGCTGA AGCACAGTTC CGGCCTGAGC TGGAGAAAAT CGTCAGCGGG
ATTGAAACAG GTTTTCGTGG CACGGCCCTG TACGCCACAG AAAACATTGC CGGTCGCATC
AATGCCCGCC TGGAGGATGA GGGCTTTACC GTAAAAATCA GTTTTCCGGC AGTCAGCCAG
TTACAGACCC GGCTCGCGGT AAAAATAAAT CTGAGTGCGC TTATGGAGGA AAGAACGGAG
ACCGTCACCC GTCGCCGTCG GCAGAGTGGC GTATGGGGAA CCGTTTGTCG ATGGTTTGGC
ACCAGTGACC TGGGCTGGGA AAACTATGAC GAGGATGTGA GTCGCAGCGT GATCAATATC
AACAAGGTCA GAGAGGAAGT TATGTCACTG ACCCGGGCAT ATTTCGGGGA GCTGCAGGCA
TCCATTGAGC AGGATATTAA CCAGCCCGTC CGCCAGGAAA TCGATGCCTT TTTCTGCGCA
TTCAGGGAGA AAGTTGAACA ACTGCGTAAC ACGCTGATTC AGAGCTCTGA AGATCATAAA
CGCGATCAGC AGGCGCAGGA ACGGCTTACC GGGCGACTTC AGGCATTAAA TGAAAGGGTT
CCTGAGCTCA TTACTGACAG TAAGGCGCTG AGGGAAGAGC TGGAGACAAT GCTGTGA
 
Protein sequence
MHEKNIALLC DEADRLLQLN INLLRQMVEE PDVLSDSKNE NRLLFDKQKA LKRIEELEGE 
QIKTARREMV LAVVGTMKAG KSTTINAIVG QEILPNRNRP MTSVPTLIRH VPGKTEPVLH
LEHIQPVRNL LITLQEKLAT PAGQQVAQTL QQTGDTRELL DILTDDGWLK NEYHGEEEIF
TGLASLNDLV RLAAAMGTEF PFDEYAEVQK LPVIDVEFSH LVGMDACQGT LTLLDTPGPN
EAGQPQMEVM MRDQLQKASA VLAVMDYTQM NSKADEDVRK ELNAIADVSA GRLFVLVNKF
DEKDRNGDGA DAVRQKVPAM LNSDVLPASR VYPGSSRQAY LANRALHELR KNGTLPVDEA
WVDDFIRGAF GCMKKEYVCK DSELATEGAT DLWEGSLIDQ LITEVIQSSH SRAAALAVDS
AAAKLMQNAE NISEYLLLRH QGLQQSIQSL QSHITSLLAD IREIADCQEQ MTTDVRMAME
EIDTKTRELL TGVCTSLEEE LNDYFRSGKR KEQQMLEEED AEQRRSQSGL WGKISQWSGI
NNQGREDYRK RDFAPDSPEI KFSDRREALE LMTQIESTVT SLHREAEAQF RPELEKIVSG
IETGFRGTAL YATENIAGRI NARLEDEGFT VKISFPAVSQ LQTRLAVKIN LSALMEERTE
TVTRRRRQSG VWGTVCRWFG TSDLGWENYD EDVSRSVINI NKVREEVMSL TRAYFGELQA
SIEQDINQPV RQEIDAFFCA FREKVEQLRN TLIQSSEDHK RDQQAQERLT GRLQALNERV
PELITDSKAL REELETML